RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 MAPKAPK5Q8IW41 473 aa23.04■■□□□ 1.28
COL5A1-203ENST00000460264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.04■■□□□ 1.28
COL5A1-203ENST00000460264 BCL11AQ9H165 835 aa23.04■■□□□ 1.28
COL5A1-203ENST00000460264 DHX36Q9H2U1 1008 aaKnown RBP23.04■■□□□ 1.28
COL5A1-203ENST00000460264 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.04■■□□□ 1.28
COL5A1-203ENST00000460264 HERC5Q9UII4 1024 aaKnown RBP23.04■■□□□ 1.28
COL5A1-203ENST00000460264 AFG3L2Q9Y4W6 797 aa23.04■■□□□ 1.28
COL5A1-203ENST00000460264 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
COL5A1-203ENST00000460264 A0A0G2JLL6 359 aaPredicted RBP23.03■■□□□ 1.28
COL5A1-203ENST00000460264 PDHXO00330 501 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 PRRT2Q7Z6L0 340 aaPredicted RBP23.03■■□□□ 1.28
COL5A1-203ENST00000460264 CERS3Q8IU89 383 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 MIGA1Q8NAN2 632 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 EFCC1Q9HA90 598 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 PI4KBQ9UBF8 816 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 LOC285556D6RIA3 1793 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 ADGRA2Q96PE1 1338 aa23.03■■□□□ 1.28
COL5A1-203ENST00000460264 MYH7P12883 1935 aa23.02■■□□□ 1.28
COL5A1-203ENST00000460264 SOX10P56693 466 aa23.02■■□□□ 1.28
COL5A1-203ENST00000460264 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
COL5A1-203ENST00000460264 CCDC84Q86UT8 332 aaPredicted RBP23.02■■□□□ 1.28
COL5A1-203ENST00000460264 NAV1Q8NEY1 1877 aa23.02■■□□□ 1.28
COL5A1-203ENST00000460264 RRP1BQ14684 758 aaKnown RBP23.01■■□□□ 1.27
COL5A1-203ENST00000460264 GPAT2Q6NUI2 795 aa23.01■■□□□ 1.27
COL5A1-203ENST00000460264 PALD1Q9ULE6 856 aa23.01■■□□□ 1.27
COL5A1-203ENST00000460264 TRIM75PA6NK02 468 aa23■■□□□ 1.27
COL5A1-203ENST00000460264 CAP2P40123 477 aa23■■□□□ 1.27
COL5A1-203ENST00000460264 MLLT1Q03111 559 aaPredicted RBP23■■□□□ 1.27
COL5A1-203ENST00000460264 FASTKD5Q7L8L6 764 aaKnown RBP23■■□□□ 1.27
COL5A1-203ENST00000460264 DNAJC2Q99543 621 aaKnown RBP23■■□□□ 1.27
COL5A1-203ENST00000460264 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
COL5A1-203ENST00000460264 PTPN22Q9Y2R2 807 aa23■■□□□ 1.27
COL5A1-203ENST00000460264 GOLIM4O00461 696 aa22.99■■□□□ 1.27
COL5A1-203ENST00000460264 PDE6AP16499 860 aa22.99■■□□□ 1.27
COL5A1-203ENST00000460264 C17orf99Q6UX52 265 aa22.99■■□□□ 1.27
COL5A1-203ENST00000460264 METTL16Q86W50 562 aaKnown RBP22.99■■□□□ 1.27
COL5A1-203ENST00000460264 PARK7Q99497 189 aaKnown RBP22.99■■□□□ 1.27
COL5A1-203ENST00000460264 DNAJC18Q9H819 358 aa22.99■■□□□ 1.27
COL5A1-203ENST00000460264 SAP30BPQ9UHR5 308 aaKnown RBP22.99■■□□□ 1.27
COL5A1-203ENST00000460264 LACTBP83111 547 aaPredicted RBP22.98■■□□□ 1.27
COL5A1-203ENST00000460264 ARHGEF6Q15052 776 aa22.98■■□□□ 1.27
COL5A1-203ENST00000460264 SLC9C2Q5TAH2 1124 aa22.98■■□□□ 1.27
COL5A1-203ENST00000460264 GADL1Q6ZQY3 521 aa22.98■■□□□ 1.27
COL5A1-203ENST00000460264 RIOK1Q9BRS2 568 aaKnown RBP22.98■■□□□ 1.27
COL5A1-203ENST00000460264 CPA4Q9UI42 421 aa22.98■■□□□ 1.27
COL5A1-203ENST00000460264 MGAMO43451 1857 aa22.98■■□□□ 1.27
COL5A1-203ENST00000460264 TNRC18O15417 2968 aaPredicted RBP22.98■■□□□ 1.27
COL5A1-203ENST00000460264 RBBP6Q7Z6E9 1792 aaKnown RBP22.97■■□□□ 1.27
COL5A1-203ENST00000460264 ATP5JP18859 108 aa22.97■■□□□ 1.27
COL5A1-203ENST00000460264 RRP1P56182 461 aaKnown RBP22.97■■□□□ 1.27
COL5A1-203ENST00000460264 FOXP4Q8IVH2 680 aaPredicted RBP22.97■■□□□ 1.27
COL5A1-203ENST00000460264 CRACR2BQ8N4Y2 399 aaPredicted RBP22.97■■□□□ 1.27
COL5A1-203ENST00000460264 EDC3Q96F86 508 aaKnown RBP22.97■■□□□ 1.27
COL5A1-203ENST00000460264 ARHGAP39Q9C0H5 1083 aa22.97■■□□□ 1.27
COL5A1-203ENST00000460264 SMARCA5O60264 1052 aaPredicted RBP22.96■■□□□ 1.27
COL5A1-203ENST00000460264 HLA-DOAP06340 250 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 CYP2C8P10632 490 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 USP5P45974 858 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 SLC4A8Q2Y0W8 1093 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 TRIM34Q9BYJ4 488 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 TBC1D2Q9BYX2 928 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 BOLA2Q9H3K6 86 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 PAG1Q9NWQ8 432 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 SLC45A1Q9Y2W3 748 aa22.96■■□□□ 1.27
COL5A1-203ENST00000460264 MAGEB6P1A0A0J9YX57 407 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 TCRBV5S4A2TA0A5A2 114 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 SPP2Q13103 211 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 KIF22Q14807 665 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 ZNF280CQ8ND82 737 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 YTHDC1Q96MU7 727 aaKnown RBP22.95■■□□□ 1.26
COL5A1-203ENST00000460264 HAUS7Q99871 368 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 DCTPP1Q9H773 170 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 ZNF532Q9HCE3 1301 aa22.95■■□□□ 1.26
COL5A1-203ENST00000460264 USP17L5A8MUK1 530 aa22.94■■□□□ 1.26
COL5A1-203ENST00000460264 JAG1P78504 1218 aa22.94■■□□□ 1.26
COL5A1-203ENST00000460264 AGTPBP1Q9UPW5 1226 aa22.94■■□□□ 1.26
COL5A1-203ENST00000460264 CENPFP49454 3210 aa22.94■■□□□ 1.26
COL5A1-203ENST00000460264 ASNSP08243 561 aa22.93■■□□□ 1.26
COL5A1-203ENST00000460264 BCRP11274 1271 aa22.93■■□□□ 1.26
COL5A1-203ENST00000460264 SHROOM1Q2M3G4 852 aaPredicted RBP22.93■■□□□ 1.26
COL5A1-203ENST00000460264 PROCA1Q8NCQ7 364 aaPredicted RBP22.93■■□□□ 1.26
COL5A1-203ENST00000460264 PTCH2Q9Y6C5 1203 aa22.93■■□□□ 1.26
COL5A1-203ENST00000460264 GDF11O95390 407 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 GNRH1P01148 92 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 CTGFP29279 349 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 TREML2Q5T2D2 321 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 ARMC5Q96C12 935 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 EHD4Q9H223 541 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 AS3MTQ9HBK9 375 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 PCDHB15Q9Y5E8 787 aa22.92■■□□□ 1.26
COL5A1-203ENST00000460264 ADD2P35612 726 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 HMGCS2P54868 508 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 TRIM47Q96LD4 638 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 WDR18Q9BV38 432 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 CRNKL1Q9BZJ0 848 aaKnown RBP22.91■■□□□ 1.26
COL5A1-203ENST00000460264 GINM1Q9NU53 330 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 SERPINB13Q9UIV8 391 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 ZBTB21Q9ULJ3 1066 aa22.91■■□□□ 1.26
COL5A1-203ENST00000460264 BAZ2AQ9UIF9 1905 aaKnown RBP22.9■■□□□ 1.26
COL5A1-203ENST00000460264 ECM2O94769 699 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms