RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 COL6A3P12111 3177 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 FARP2O94887 1054 aaPredicted RBP16.36■□□□□ 0.21
SRRT-206ENST00000460194 MAP4K4O95819 1239 aaPredicted RBP16.36■□□□□ 0.21
SRRT-206ENST00000460194 FAM110CQ1W6H9 321 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 ANKRD13CQ8N6S4 541 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 PROCA1Q8NCQ7 364 aaPredicted RBP16.36■□□□□ 0.21
SRRT-206ENST00000460194 OSBPL5Q9H0X9 879 aaPredicted RBP16.36■□□□□ 0.21
SRRT-206ENST00000460194 BIN2Q9UBW5 565 aaPredicted RBP16.36■□□□□ 0.21
SRRT-206ENST00000460194 GJD2Q9UKL4 321 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 AKAP2Q9Y2D5 859 aa16.36■□□□□ 0.21
SRRT-206ENST00000460194 TNPO2O14787 897 aaKnown RBP16.35■□□□□ 0.21
SRRT-206ENST00000460194 CAPN2P17655 700 aa16.35■□□□□ 0.21
SRRT-206ENST00000460194 MVPQ14764 893 aaKnown RBP16.35■□□□□ 0.21
SRRT-206ENST00000460194 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
SRRT-206ENST00000460194 SPATA5Q8NB90 893 aa16.35■□□□□ 0.21
SRRT-206ENST00000460194 MAST2Q6P0Q8 1798 aa16.34■□□□□ 0.21
SRRT-206ENST00000460194 CAP2P40123 477 aa16.34■□□□□ 0.21
SRRT-206ENST00000460194 MCAMP43121 646 aa16.34■□□□□ 0.21
SRRT-206ENST00000460194 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
SRRT-206ENST00000460194 SPP2Q13103 211 aa16.34■□□□□ 0.21
SRRT-206ENST00000460194 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
SRRT-206ENST00000460194 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
SRRT-206ENST00000460194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
SRRT-206ENST00000460194 PNMA6EA0A0J9YXQ4 647 aa16.33■□□□□ 0.2
SRRT-206ENST00000460194 GNAI3P08754 354 aa16.33■□□□□ 0.2
SRRT-206ENST00000460194 JAG1P78504 1218 aa16.33■□□□□ 0.2
SRRT-206ENST00000460194 METTL16Q86W50 562 aaKnown RBP16.33■□□□□ 0.2
SRRT-206ENST00000460194 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.2
SRRT-206ENST00000460194 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
SRRT-206ENST00000460194 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
SRRT-206ENST00000460194 DNAJC18Q9H819 358 aa16.32■□□□□ 0.2
SRRT-206ENST00000460194 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
SRRT-206ENST00000460194 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
SRRT-206ENST00000460194 A0A1W2PPC1 479 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 SOX1O00570 391 aaPredicted RBP16.31■□□□□ 0.2
SRRT-206ENST00000460194 LDHCP07864 332 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 TRIM27P14373 513 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
SRRT-206ENST00000460194 HMGCS2P54868 508 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
SRRT-206ENST00000460194 COA7Q96BR5 231 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
SRRT-206ENST00000460194 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 PNMA3Q9UL41 463 aa16.31■□□□□ 0.2
SRRT-206ENST00000460194 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
SRRT-206ENST00000460194 TFRCP02786 760 aaKnown RBP16.3■□□□□ 0.2
SRRT-206ENST00000460194 PPP4CP60510 307 aa16.3■□□□□ 0.2
SRRT-206ENST00000460194 GSTO1P78417 241 aa16.3■□□□□ 0.2
SRRT-206ENST00000460194 TRIM32Q13049 653 aa16.3■□□□□ 0.2
SRRT-206ENST00000460194 POTEEQ6S8J3 1075 aa16.3■□□□□ 0.2
SRRT-206ENST00000460194 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
SRRT-206ENST00000460194 SH3RF3Q8TEJ3 882 aaPredicted RBP16.3■□□□□ 0.2
SRRT-206ENST00000460194 PAWRQ96IZ0 340 aaKnown RBP16.3■□□□□ 0.2
SRRT-206ENST00000460194 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.3■□□□□ 0.21e-20■■■□□ 17.5
SRRT-206ENST00000460194 HERC5Q9UII4 1024 aaKnown RBP16.3■□□□□ 0.2
SRRT-206ENST00000460194 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
SRRT-206ENST00000460194 POLA2Q14181 598 aa16.29■□□□□ 0.2
SRRT-206ENST00000460194 SHROOM1Q2M3G4 852 aaPredicted RBP16.29■□□□□ 0.2
SRRT-206ENST00000460194 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
SRRT-206ENST00000460194 RAI14Q9P0K7 980 aa16.29■□□□□ 0.2
SRRT-206ENST00000460194 MYH1P12882 1939 aa16.29■□□□□ 0.2
SRRT-206ENST00000460194 EVI5O60447 810 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 PEX10O60683 326 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 HMGCRP04035 888 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 TEX11Q8IYF3 940 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 ANKLE1Q8NAG6 615 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 TRIB2Q92519 343 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 GDF15Q99988 308 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 GPR108Q9NPR9 543 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
SRRT-206ENST00000460194 RPTORQ8N122 1335 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 FRMPD3Q5JV73 1810 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 GNAI2P04899 355 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 CYP2E1P05181 493 aaPredicted RBP16.27■□□□□ 0.2
SRRT-206ENST00000460194 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 BACE1P56817 501 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 USP6NLQ92738 828 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 DHX36Q9H2U1 1008 aaKnown RBP16.27■□□□□ 0.2
SRRT-206ENST00000460194 STAP2Q9UGK3 403 aa16.27■□□□□ 0.2
SRRT-206ENST00000460194 DNAH12Q6ZR08 3092 aa16.27■□□□□ 0.19
SRRT-206ENST00000460194 A0A0C4DFX4 3053 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 BCAR3O75815 825 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 BMP8BP34820 402 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 PABPC4Q13310 644 aaKnown RBP eCLIP16.26■□□□□ 0.19
SRRT-206ENST00000460194 MTMR2Q13614 643 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 ATF7IPQ6VMQ6 1270 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 SSH3Q8TE77 659 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 LRCH3Q96II8 777 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
SRRT-206ENST00000460194 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
SRRT-206ENST00000460194 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.19
SRRT-206ENST00000460194 LRP2BPQ9P2M1 347 aa16.26■□□□□ 0.19
SRRT-206ENST00000460194 RBPJLQ9UBG7 517 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms