RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CCDC34Q96HJ3 373 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 TIGD1Q96MW7 591 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 H2AFXP16104 143 aaPredicted RBP22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 MFSD6Q6ZSS7 791 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 LCORLQ8N3X6 602 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 LZTFL1Q9NQ48 299 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 FHOD1Q9Y613 1164 aa22.44■■□□□ 1.18
CNEP1R1-203ENST00000458059 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 PNMA6AP0CW24 399 aaPredicted RBP22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 RTN1Q16799 776 aa22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 SDR42E1Q8WUS8 393 aa22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 ZCCHC17Q9NP64 241 aaKnown RBP22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 SLC4A4Q9Y6R1 1079 aa22.43■■□□□ 1.18
CNEP1R1-203ENST00000458059 TTF1Q15361 905 aaPredicted RBP22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 SPATA5Q8NB90 893 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 SMARCE1Q969G3 411 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 TMEM87BQ96K49 555 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 MAP3K15Q6ZN16 1313 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 NUP188Q5SRE5 1749 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 STARD3NLO95772 234 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 BCAMP50895 628 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 UBE3CQ15386 1083 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 TMCO3Q6UWJ1 677 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 KCND1Q9NSA2 647 aa22.42■■□□□ 1.18
CNEP1R1-203ENST00000458059 A0A0U1RQG5 324 aaPredicted RBP22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 TEX33O43247 280 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 BMS1Q14692 1282 aaKnown RBP22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 CADPS2Q86UW7 1296 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 LMTK3Q96Q04 1460 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 TCRBV5S4A2TA0A5A2 114 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 WTAPQ15007 396 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 TMEM139Q8IV31 216 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 TRIM22Q8IYM9 498 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 VGLL2Q8N8G2 317 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 EPSTI1Q96J88 318 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 MED15Q96RN5 788 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 NOL10Q9BSC4 688 aaKnown RBP22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 CSRNP2Q9H175 543 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 VPS54Q9P1Q0 977 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 ABCF2Q9UG63 623 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 TFRCP02786 760 aaKnown RBP22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 MMP1P03956 469 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 CASQ1P31415 396 aa22.41■■□□□ 1.18
CNEP1R1-203ENST00000458059 WTIPA6NIX2 430 aaPredicted RBP22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 SOWAHDA6NJG2 315 aa22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 NOM1Q5C9Z4 860 aaKnown RBP22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 C4AP0C0L4 1744 aa22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 C4BP0C0L5 1744 aa22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 CYP2D7A0A087X1C5 515 aa22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 SLC4A8Q2Y0W8 1093 aa22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 AKNAD1Q5T1N1 836 aa22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 FBXO2Q9UK22 296 aaPredicted RBP22.4■■□□□ 1.18
CNEP1R1-203ENST00000458059 GSG1L2A8MUP6 293 aa22.39■■□□□ 1.18
CNEP1R1-203ENST00000458059 PATL2C9JE40 543 aaKnown RBP22.39■■□□□ 1.18
CNEP1R1-203ENST00000458059 FMNL1O95466 1100 aaPredicted RBP22.39■■□□□ 1.18
CNEP1R1-203ENST00000458059 PLA2G4AP47712 749 aa22.39■■□□□ 1.18
CNEP1R1-203ENST00000458059 TC2NQ8N9U0 490 aa22.39■■□□□ 1.18
CNEP1R1-203ENST00000458059 SLC4A9Q96Q91 983 aa22.39■■□□□ 1.18
CNEP1R1-203ENST00000458059 MAP3K12Q12852 859 aa22.39■■□□□ 1.17
CNEP1R1-203ENST00000458059 AKAP11Q9UKA4 1901 aa22.39■■□□□ 1.17
CNEP1R1-203ENST00000458059 ARHGAP6O43182 974 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 ZSCAN12O43309 604 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 TADA3O75528 432 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 MDM2Q00987 491 aaPredicted RBP22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 EARS2Q5JPH6 523 aaKnown RBP22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 LRP2BPQ9P2M1 347 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 PHLPP2Q6ZVD8 1323 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 GYS2P54840 703 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 BRINP3Q76B58 766 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 CCDC12Q8WUD4 166 aaPredicted RBP22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 MPHOSPH8Q99549 860 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 MRPL44Q9H9J2 332 aaKnown RBP22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 ERICH2A1L162 156 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 WNT7AO00755 349 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 SPECC1LQ69YQ0 1117 aa22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.38■■□□□ 1.17
CNEP1R1-203ENST00000458059 A0A087X0B3 334 aa22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 PUM3Q15397 648 aaKnown RBP22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 SGMS1Q86VZ5 419 aa22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 PUF60Q9UHX1 559 aaKnown RBP22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 FBXO3Q9UK99 471 aa22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 WDR19Q8NEZ3 1342 aa22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 TRIM28Q13263 835 aaKnown RBP22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 PKD1L3Q7Z443 1732 aa22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 TEX13AQ9BXU3 409 aaPredicted RBP22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 MYH7P12883 1935 aa22.37■■□□□ 1.17
CNEP1R1-203ENST00000458059 PLA2G12BQ9BX93 195 aa22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 ARGLU1Q9NWB6 273 aaPredicted RBP22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 CCP110O43303 1012 aa22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 IFNAR1P17181 557 aa22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 PPP2R3AQ06190 1150 aa22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 DZIP3Q86Y13 1208 aaKnown RBP22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
CNEP1R1-203ENST00000458059 PTPREP23469 700 aa22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 CCT6AP40227 531 aaKnown RBP22.35■■□□□ 1.17
CNEP1R1-203ENST00000458059 LPIN2Q92539 896 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms