RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 EN2P19622 333 aaPredicted RBP22.69■■□□□ 1.22
UBE2D4-208ENST00000454350 KIF22Q14807 665 aa22.69■■□□□ 1.22
UBE2D4-208ENST00000454350 SLC9C1Q4G0N8 1177 aa22.69■■□□□ 1.22
UBE2D4-208ENST00000454350 FASTKD5Q7L8L6 764 aaKnown RBP22.69■■□□□ 1.22
UBE2D4-208ENST00000454350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.69■■□□□ 1.22
UBE2D4-208ENST00000454350 PSMC4P43686 418 aa22.68■■□□□ 1.22
UBE2D4-208ENST00000454350 PARK7Q99497 189 aaKnown RBP22.68■■□□□ 1.22
UBE2D4-208ENST00000454350 EXOC6BQ9Y2D4 811 aa22.68■■□□□ 1.22
UBE2D4-208ENST00000454350 SLC45A1Q9Y2W3 748 aa22.68■■□□□ 1.22
UBE2D4-208ENST00000454350 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 IGSF3O75054 1194 aa22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 ECM2O94769 699 aaPredicted RBP22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 CAP2P40123 477 aa22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 PRPF38BQ5VTL8 546 aaKnown RBP22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 METTL16Q86W50 562 aaKnown RBP22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 SH3TC2Q8TF17 1288 aa22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 DNAJC18Q9H819 358 aa22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 SRRDQ9UH36 339 aa22.67■■□□□ 1.22
UBE2D4-208ENST00000454350 SLC34A2O95436 690 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 OSBPP22059 807 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 PRMT2P55345 433 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 GADL1Q6ZQY3 521 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 SIRT2Q8IXJ6 389 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 TGFBRAP1Q8WUH2 860 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 NDUFB9Q9Y6M9 179 aa22.66■■□□□ 1.22
UBE2D4-208ENST00000454350 FLT1P17948 1338 aa22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 BAG3O95817 575 aa22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 JAG1P78504 1218 aa22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 NBPF11Q86T75 865 aa22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 ANTXR1Q9H6X2 564 aa22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 PI4KBQ9UBF8 816 aa22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 HERC5Q9UII4 1024 aaKnown RBP22.65■■□□□ 1.22
UBE2D4-208ENST00000454350 PLCG2P16885 1265 aa22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 DYNLL1P63167 89 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 TREML2Q5T2D2 321 aa22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 MAPKAPK5Q8IW41 473 aa22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 DHX36Q9H2U1 1008 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 ZBTB40Q9NUA8 1239 aa22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 AGTPBP1Q9UPW5 1226 aa22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 DDX60LQ5H9U9 1706 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-208ENST00000454350 SPP2Q13103 211 aa22.63■■□□□ 1.21
UBE2D4-208ENST00000454350 ERC1Q8IUD2 1116 aa22.63■■□□□ 1.21
UBE2D4-208ENST00000454350 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
UBE2D4-208ENST00000454350 CYP7A1P22680 504 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 SHROOM1Q2M3G4 852 aaPredicted RBP22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 AACSQ86V21 672 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 PROCA1Q8NCQ7 364 aaPredicted RBP22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 ZNF280CQ8ND82 737 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 RHPN1Q8TCX5 695 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 TMEM106CQ9BVX2 250 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 IL1RAPL2Q9NP60 686 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 PALD1Q9ULE6 856 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 COG6Q9Y2V7 657 aa22.62■■□□□ 1.21
UBE2D4-208ENST00000454350 MYPNQ86TC9 1320 aa22.61■■□□□ 1.21
UBE2D4-208ENST00000454350 CEP290O15078 2479 aa22.61■■□□□ 1.21
UBE2D4-208ENST00000454350 IDH1O75874 414 aaKnown RBP22.61■■□□□ 1.21
UBE2D4-208ENST00000454350 FMNL1O95466 1100 aaPredicted RBP22.61■■□□□ 1.21
UBE2D4-208ENST00000454350 MS4A1P11836 297 aa22.61■■□□□ 1.21
UBE2D4-208ENST00000454350 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
UBE2D4-208ENST00000454350 PLXNB2O15031 1838 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 USP17L5A8MUK1 530 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 MYCP01106 439 aaPredicted RBP22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 HOXD10P28358 340 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 PRKCZQ05513 592 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 MTFR1Q15390 333 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 FOXP4Q8IVH2 680 aaPredicted RBP22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 RPAP2Q8IXW5 612 aaPredicted RBP22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 TBC1D2Q9BYX2 928 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 GABRQQ9UN88 632 aa22.6■■□□□ 1.21
UBE2D4-208ENST00000454350 HMGCS2P54868 508 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 FCGRTP55899 365 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 MAGEB6Q8N7X4 407 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 MIGA1Q8NAN2 632 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 WDR18Q9BV38 432 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 DDX19BQ9UMR2 479 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 NAV1Q8NEY1 1877 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 MYH7P12883 1935 aa22.59■■□□□ 1.21
UBE2D4-208ENST00000454350 GRK4P32298 578 aa22.58■■□□□ 1.21
UBE2D4-208ENST00000454350 SLC4A8Q2Y0W8 1093 aa22.58■■□□□ 1.21
UBE2D4-208ENST00000454350 HSP90AB4PQ58FF6 505 aa22.58■■□□□ 1.21
UBE2D4-208ENST00000454350 SAP30BPQ9UHR5 308 aaKnown RBP22.58■■□□□ 1.21
UBE2D4-208ENST00000454350 RCAN3Q9UKA8 241 aa22.58■■□□□ 1.21
UBE2D4-208ENST00000454350 RAET1EQ8TD07 263 aa22.57■■□□□ 1.2
UBE2D4-208ENST00000454350 SMCR8Q8TEV9 937 aaPredicted RBP22.57■■□□□ 1.2
UBE2D4-208ENST00000454350 SHISA4Q96DD7 197 aa22.57■■□□□ 1.2
UBE2D4-208ENST00000454350 ASNSP08243 561 aa22.56■■□□□ 1.2
UBE2D4-208ENST00000454350 ANKRD13CQ8N6S4 541 aa22.56■■□□□ 1.2
UBE2D4-208ENST00000454350 KIF1BPQ96EK5 621 aa22.56■■□□□ 1.2
UBE2D4-208ENST00000454350 RIOK1Q9BRS2 568 aaKnown RBP22.56■■□□□ 1.2
UBE2D4-208ENST00000454350 BACE1P56817 501 aa22.55■■□□□ 1.2
UBE2D4-208ENST00000454350 MAP3K12Q12852 859 aa22.55■■□□□ 1.2
UBE2D4-208ENST00000454350 C20orf194Q5TEA3 1177 aa22.55■■□□□ 1.2
UBE2D4-208ENST00000454350 TMED8Q6PL24 325 aaPredicted RBP22.55■■□□□ 1.2
UBE2D4-208ENST00000454350 ASCC2Q9H1I8 757 aaPredicted RBP22.55■■□□□ 1.2
UBE2D4-208ENST00000454350 ZBTB21Q9ULJ3 1066 aa22.55■■□□□ 1.2
UBE2D4-208ENST00000454350 GDF11O95390 407 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 FLT3LGP49771 235 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 MTMR2Q13614 643 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 FAM110CQ1W6H9 321 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms