RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 DRC1Q96MC2 740 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 AZI2Q9H6S1 392 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 ATP8A2Q9NTI2 1148 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 HMG20BQ9P0W2 317 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 ZNF853P0CG23 659 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 SP3Q02447 781 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 NBPF12Q5TAG4 269 aaPredicted RBP9.81□□□□□ -0.84
HCG18-238ENST00000449544 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 PRMT6Q96LA8 375 aaPredicted RBP9.81□□□□□ -0.84
HCG18-238ENST00000449544 BMP2KQ9NSY1 1161 aaPredicted RBP9.81□□□□□ -0.84
HCG18-238ENST00000449544 CPA4Q9UI42 421 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 CCPG1Q9ULG6 757 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 TTC41PQ6P2S7 1318 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 HMGB1P09429 215 aaKnown RBP9.81□□□□□ -0.84
HCG18-238ENST00000449544 RAB11FIP4Q86YS3 637 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 LRRC47Q8N1G4 583 aaKnown RBP9.81□□□□□ -0.84
HCG18-238ENST00000449544 OPTNQ96CV9 577 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 ZKSCAN3Q9BRR0 538 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 HTATIP2Q9BUP3 242 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
HCG18-238ENST00000449544 PTGER2P43116 358 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 DYNLL1P63167 89 aaKnown RBP9.8□□□□□ -0.84
HCG18-238ENST00000449544 PLCB2Q00722 1185 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 GLG1Q92896 1179 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 FTOQ9C0B1 505 aaKnown RBP eCLIP9.8□□□□□ -0.84
HCG18-238ENST00000449544 HERC5Q9UII4 1024 aaKnown RBP9.8□□□□□ -0.84
HCG18-238ENST00000449544 GNPTABQ3T906 1256 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 FAM47AQ5JRC9 791 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 EEPD1Q7L9B9 569 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 KBTBD3Q8NAB2 608 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 NFKBIEO00221 500 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 PTPN12Q05209 780 aaKnown RBP9.8□□□□□ -0.84
HCG18-238ENST00000449544 PI16Q6UXB8 463 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 ZKSCAN4Q969J2 545 aaPredicted RBP9.8□□□□□ -0.84
HCG18-238ENST00000449544 C6orf50Q9HD87 102 aa9.8□□□□□ -0.84
HCG18-238ENST00000449544 WNT10BO00744 389 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 LBX1P52954 281 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 MAP3K11Q16584 847 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 TPD52L1Q16890 204 aaPredicted RBP9.79□□□□□ -0.84
HCG18-238ENST00000449544 EPHA10Q5JZY3 1008 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 ERICH6BQ5W0A0 696 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 TNNQ9UQP3 1299 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 ZNF541Q9H0D2 1346 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 TRPM4Q8TD43 1214 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 ABCC12Q96J65 1359 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 TBC1D8O95759 1140 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 FCER1AP12319 257 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 PSMC4P43686 418 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 EAF2Q96CJ1 260 aaPredicted RBP9.79□□□□□ -0.84
HCG18-238ENST00000449544 ZBTB21Q9ULJ3 1066 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 NRKQ7Z2Y5 1582 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 CEMIPQ8WUJ3 1361 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 SPDYE2BA6NHP3 402 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 SPDYE6P0CI01 402 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 ARHGEF16Q5VV41 709 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 HHIPL2Q6UWX4 724 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 RAB34Q9BZG1 259 aa9.79□□□□□ -0.84
HCG18-238ENST00000449544 WDR33Q9C0J8 1336 aaKnown RBP9.78□□□□□ -0.84
HCG18-238ENST00000449544 XRN1Q8IZH2 1706 aaKnown RBP9.78□□□□□ -0.84
HCG18-238ENST00000449544 CALM1P0DP23 149 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 CALM2P0DP24 149 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 CALM3P0DP25 149 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 TMEM179Q6ZVK1 233 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 ANKRD13CQ8N6S4 541 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 FBXO40Q9UH90 709 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 DAGLAQ9Y4D2 1042 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
HCG18-238ENST00000449544 COL16A1Q07092 1604 aaPredicted RBP9.78□□□□□ -0.84
HCG18-238ENST00000449544 TLR3O15455 904 aaKnown RBP9.78□□□□□ -0.84
HCG18-238ENST00000449544 ENTPD3O75355 529 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 PDE1AP54750 535 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 C20orf194Q5TEA3 1177 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 GPRC5AQ8NFJ5 357 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 NALCNQ8IZF0 1738 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 ZBTB43O43298 467 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 ATP6V1DQ9Y5K8 247 aa9.78□□□□□ -0.84
HCG18-238ENST00000449544 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.84
HCG18-238ENST00000449544 C19orf81C9J6K1 198 aa9.77□□□□□ -0.84
HCG18-238ENST00000449544 CSPG5O95196 566 aa9.77□□□□□ -0.84
HCG18-238ENST00000449544 HDLBPQ00341 1268 aaKnown RBP9.77□□□□□ -0.84
HCG18-238ENST00000449544 Q3C1V9 767 aa9.77□□□□□ -0.84
HCG18-238ENST00000449544 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.84
HCG18-238ENST00000449544 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
HCG18-238ENST00000449544 METAP2P50579 478 aaKnown RBP eCLIP9.77□□□□□ -0.85
HCG18-238ENST00000449544 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
HCG18-238ENST00000449544 NMIQ13287 307 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms