RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ZIC2O95409 532 aaPredicted RBP9.66□□□□□ -0.86
SSXP3-201ENST00000442971 IRS1P35568 1242 aa9.66□□□□□ -0.86
SSXP3-201ENST00000442971 NBL1P41271 181 aa9.66□□□□□ -0.86
SSXP3-201ENST00000442971 TLE2Q04725 743 aa9.66□□□□□ -0.86
SSXP3-201ENST00000442971 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.66□□□□□ -0.86
SSXP3-201ENST00000442971 ARAP2Q8WZ64 1704 aa9.66□□□□□ -0.86
SSXP3-201ENST00000442971 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
SSXP3-201ENST00000442971 MED23Q9ULK4 1368 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 CLTBP09497 229 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 GTF2IP78347 998 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 FAM110CQ1W6H9 321 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 LEXMQ3ZCV2 418 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 EPHA10Q5JZY3 1008 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 TMEM240Q5SV17 173 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 LPAR1Q92633 364 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
SSXP3-201ENST00000442971 EP300Q09472 2414 aaPredicted RBP9.65□□□□□ -0.86
SSXP3-201ENST00000442971 CEP250Q9BV73 2442 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 ASPMQ8IZT6 3477 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 XRCC5P13010 732 aaKnown RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 ZKSCAN1P17029 563 aaPredicted RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 C1orf53Q5VUE5 145 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 PTCRAQ6ISU1 281 aaPredicted RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 C16orf59Q7L2K0 433 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 TRMT44Q8IYL2 757 aaKnown RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 NKD2Q969F2 451 aaPredicted RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 ZNF70Q9UC06 446 aaPredicted RBP9.64□□□□□ -0.87
SSXP3-201ENST00000442971 JAG2Q9Y219 1238 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
SSXP3-201ENST00000442971 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
SSXP3-201ENST00000442971 TCP10L2B9ZVM9 353 aa9.63□□□□□ -0.87
SSXP3-201ENST00000442971 F8W031 263 aaPredicted RBP9.63□□□□□ -0.87
SSXP3-201ENST00000442971 M0R296 226 aa9.63□□□□□ -0.87
SSXP3-201ENST00000442971 RBM5P52756 815 aaKnown RBP eCLIP9.63□□□□□ -0.87
SSXP3-201ENST00000442971 GJC2Q5T442 439 aaPredicted RBP9.63□□□□□ -0.87
SSXP3-201ENST00000442971 FASTKD5Q7L8L6 764 aaKnown RBP9.63□□□□□ -0.87
SSXP3-201ENST00000442971 FBXL6Q8N531 539 aa9.63□□□□□ -0.87
SSXP3-201ENST00000442971 CERS5Q8N5B7 392 aa9.63□□□□□ -0.87
SSXP3-201ENST00000442971 UBE2ZQ9H832 354 aaPredicted RBP9.63□□□□□ -0.87
SSXP3-201ENST00000442971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.62□□□□□ -0.87
SSXP3-201ENST00000442971 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
SSXP3-201ENST00000442971 CXCL11O14625 94 aa9.62□□□□□ -0.87
SSXP3-201ENST00000442971 SLC5A1P13866 664 aa9.62□□□□□ -0.87
SSXP3-201ENST00000442971 TNNI2P48788 182 aa9.62□□□□□ -0.87
SSXP3-201ENST00000442971 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
SSXP3-201ENST00000442971 EDAQ92838 391 aa9.62□□□□□ -0.87
SSXP3-201ENST00000442971 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
SSXP3-201ENST00000442971 DDX20Q9UHI6 824 aaKnown RBP9.62□□□□□ -0.87
SSXP3-201ENST00000442971 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 MSCO60682 206 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 INPP5BP32019 993 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 HSP90AB3PQ58FF7 597 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 ARRDC4Q8NCT1 418 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 ZNF428Q96B54 188 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 TDRD3Q9H7E2 651 aaKnown RBP9.61□□□□□ -0.87
SSXP3-201ENST00000442971 TMEM39AQ9NV64 488 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 DLL3Q9NYJ7 618 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 MUTYHQ9UIF7 546 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 ZNF521Q96K83 1311 aa9.61□□□□□ -0.87
SSXP3-201ENST00000442971 MYOGP15173 224 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 KCNA5P22460 613 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 RABGGTBP53611 331 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 VCPP55072 806 aaKnown RBP9.6□□□□□ -0.87
SSXP3-201ENST00000442971 ZP2Q05996 745 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.87
SSXP3-201ENST00000442971 GADL1Q6ZQY3 521 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 TRIM67Q6ZTA4 783 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 ZNF365Q70YC5 407 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 SLC44A5Q8NCS7 719 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
SSXP3-201ENST00000442971 A0A0G2JLL6 359 aaPredicted RBP9.59□□□□□ -0.87
SSXP3-201ENST00000442971 EPOPA6NHQ4 379 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 CYSRT1A8MQ03 144 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 AVPR2P30518 371 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 ADCYAP1R1P41586 468 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 CCL14Q16627 93 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
SSXP3-201ENST00000442971 PSRC1Q6PGN9 363 aaPredicted RBP9.59□□□□□ -0.87
SSXP3-201ENST00000442971 PRRT2Q7Z6L0 340 aaPredicted RBP9.59□□□□□ -0.87
SSXP3-201ENST00000442971 FERMT2Q96AC1 680 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 HOOK2Q96ED9 719 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 CERS4Q9HA82 394 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 PRKAG3Q9UGI9 489 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 ZNF536O15090 1300 aa9.59□□□□□ -0.87
SSXP3-201ENST00000442971 KDM4AO75164 1064 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 TIMP1P01033 207 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 CNGA1P29973 690 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 DCAF15Q66K64 600 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 MFSD5Q6N075 450 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 FRMD5Q7Z6J6 570 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 SOCS4Q8WXH5 440 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 ZNF341Q9BYN7 854 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 PCDHA11Q9Y5I1 949 aa9.58□□□□□ -0.88
SSXP3-201ENST00000442971 PQBP1O60828 265 aaKnown RBP9.57□□□□□ -0.88
SSXP3-201ENST00000442971 ACRP10323 421 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms