RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 AK9Q5TCS8 1911 aa17.43■□□□□ 0.38
LINC00642-202ENST00000442515 FAM196BA6NMK8 535 aa17.42■□□□□ 0.38
LINC00642-202ENST00000442515 ZNF280CQ8ND82 737 aa17.42■□□□□ 0.38
LINC00642-202ENST00000442515 SOCS4Q8WXH5 440 aa17.42■□□□□ 0.38
LINC00642-202ENST00000442515 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
LINC00642-202ENST00000442515 MORF4L1Q9UBU8 362 aa17.42■□□□□ 0.38
LINC00642-202ENST00000442515 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
LINC00642-202ENST00000442515 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
LINC00642-202ENST00000442515 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
LINC00642-202ENST00000442515 NUDT12Q9BQG2 462 aa17.41■□□□□ 0.38
LINC00642-202ENST00000442515 DENND2AQ9ULE3 1009 aa17.41■□□□□ 0.38
LINC00642-202ENST00000442515 SALL2Q9Y467 1007 aaPredicted RBP17.41■□□□□ 0.38
LINC00642-202ENST00000442515 PHIPQ8WWQ0 1821 aa17.41■□□□□ 0.38
LINC00642-202ENST00000442515 TTC28Q96AY4 2481 aa17.41■□□□□ 0.38
LINC00642-202ENST00000442515 TBC1D12O60347 775 aa17.4■□□□□ 0.38
LINC00642-202ENST00000442515 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 BTDP43251 543 aa17.4■□□□□ 0.38
LINC00642-202ENST00000442515 CACNB2Q08289 660 aaPredicted RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 LHX8Q68G74 356 aa17.4■□□□□ 0.38
LINC00642-202ENST00000442515 DZIP1Q86YF9 867 aaKnown RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 MAFAQ8NHW3 353 aaPredicted RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 CDX2Q99626 313 aaPredicted RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 LBHD1Q9BQE6 289 aaPredicted RBP17.4■□□□□ 0.38
LINC00642-202ENST00000442515 SEMA3EO15041 775 aa17.39■□□□□ 0.37
LINC00642-202ENST00000442515 PEX10O60683 326 aa17.39■□□□□ 0.37
LINC00642-202ENST00000442515 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
LINC00642-202ENST00000442515 PHKA1P46020 1223 aa17.39■□□□□ 0.37
LINC00642-202ENST00000442515 ATP2B3Q16720 1220 aa17.39■□□□□ 0.37
LINC00642-202ENST00000442515 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
LINC00642-202ENST00000442515 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
LINC00642-202ENST00000442515 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
LINC00642-202ENST00000442515 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
LINC00642-202ENST00000442515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC00642-202ENST00000442515 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
LINC00642-202ENST00000442515 SH3D19Q5HYK7 790 aa17.38■□□□□ 0.37
LINC00642-202ENST00000442515 TXNRD2Q9NNW7 524 aa17.38■□□□□ 0.37
LINC00642-202ENST00000442515 IRX3P78415 501 aaPredicted RBP17.37■□□□□ 0.37
LINC00642-202ENST00000442515 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
LINC00642-202ENST00000442515 RRP1BQ14684 758 aaKnown RBP17.37■□□□□ 0.37
LINC00642-202ENST00000442515 CCL14Q16627 93 aa17.37■□□□□ 0.37
LINC00642-202ENST00000442515 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
LINC00642-202ENST00000442515 MROH7-TTC4A0A0A0MT08 1334 aa17.37■□□□□ 0.37
LINC00642-202ENST00000442515 PLXNB2O15031 1838 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 RHBDL3P58872 404 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 SLF2Q8IX21 1173 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 GPRC5AQ8NFJ5 357 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 USP6NLQ92738 828 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
LINC00642-202ENST00000442515 SENP6Q9GZR1 1112 aaPredicted RBP17.36■□□□□ 0.37
LINC00642-202ENST00000442515 SIL1Q9H173 461 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 ABCF2Q9UG63 623 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
LINC00642-202ENST00000442515 MAPK4P31152 587 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 CAP2P40123 477 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 RGS2P41220 211 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 HERVK_113P62684 666 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 MTMR2Q13614 643 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 RASGRF1Q13972 1273 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 MYLIPQ8WY64 445 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 P2RX7Q99572 595 aaKnown RBP17.35■□□□□ 0.37
LINC00642-202ENST00000442515 APBA2Q99767 749 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 AS3MTQ9HBK9 375 aa17.35■□□□□ 0.37
LINC00642-202ENST00000442515 ZBTB22O15209 634 aa17.34■□□□□ 0.37
LINC00642-202ENST00000442515 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
LINC00642-202ENST00000442515 ADORA1P30542 326 aa17.34■□□□□ 0.37
LINC00642-202ENST00000442515 ATN1P54259 1190 aaPredicted RBP17.34■□□□□ 0.37
LINC00642-202ENST00000442515 MORN1Q5T089 497 aa17.34■□□□□ 0.37
LINC00642-202ENST00000442515 CCDC102BQ68D86 513 aa17.34■□□□□ 0.37
LINC00642-202ENST00000442515 PORCNQ9H237 461 aa17.34■□□□□ 0.37
LINC00642-202ENST00000442515 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
LINC00642-202ENST00000442515 GPR75-ASB3A0A0A6YYF3 556 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 CIAO1O76071 339 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 HOXA7P31268 230 aaPredicted RBP17.33■□□□□ 0.36
LINC00642-202ENST00000442515 BACE1P56817 501 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 ERVK-9P63128 1117 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 ERVK-24P63145 666 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 GPR142Q7Z601 462 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 TTYH1Q9H313 450 aaPredicted RBP17.33■□□□□ 0.36
LINC00642-202ENST00000442515 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
LINC00642-202ENST00000442515 PDS5AQ29RF7 1337 aaKnown RBP17.32■□□□□ 0.36
LINC00642-202ENST00000442515 FOSL2P15408 326 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 COL9A1P20849 921 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 RTP1P59025 263 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 MECOMQ03112 1051 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 SHHQ15465 462 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 Q3C1V9 767 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 PLEKHH3Q7Z736 793 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
LINC00642-202ENST00000442515 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
LINC00642-202ENST00000442515 WDR18Q9BV38 432 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 RBPJLQ9UBG7 517 aa17.32■□□□□ 0.36
LINC00642-202ENST00000442515 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms