RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 DHX36Q9H2U1 1008 aaKnown RBP23.06■■□□□ 1.28
HMGB3P22-201ENST00000442010 PICK1Q9NRD5 415 aa23.06■■□□□ 1.28
HMGB3P22-201ENST00000442010 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 IFIT2P09913 472 aaKnown RBP23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 RRP1BQ14684 758 aaKnown RBP23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 GPAT2Q6NUI2 795 aa23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 METTL16Q86W50 562 aaKnown RBP23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 MAPKAPK5Q8IW41 473 aa23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 PI4KBQ9UBF8 816 aa23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 ADGRA2Q96PE1 1338 aa23.05■■□□□ 1.28
HMGB3P22-201ENST00000442010 PDHXO00330 501 aa23.04■■□□□ 1.28
HMGB3P22-201ENST00000442010 MAP3K12Q12852 859 aa23.04■■□□□ 1.28
HMGB3P22-201ENST00000442010 HERC5Q9UII4 1024 aaKnown RBP23.04■■□□□ 1.28
HMGB3P22-201ENST00000442010 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
HMGB3P22-201ENST00000442010 C17orf99Q6UX52 265 aa23.03■■□□□ 1.28
HMGB3P22-201ENST00000442010 MIGA1Q8NAN2 632 aa23.03■■□□□ 1.28
HMGB3P22-201ENST00000442010 DNAJC18Q9H819 358 aa23.03■■□□□ 1.28
HMGB3P22-201ENST00000442010 EFCC1Q9HA90 598 aa23.03■■□□□ 1.28
HMGB3P22-201ENST00000442010 PTPN22Q9Y2R2 807 aa23.03■■□□□ 1.28
HMGB3P22-201ENST00000442010 LOC285556D6RIA3 1793 aa23.03■■□□□ 1.28
HMGB3P22-201ENST00000442010 MGAMO43451 1857 aa23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 CENPFP49454 3210 aa23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 CAP2P40123 477 aa23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 CCDC84Q86UT8 332 aaPredicted RBP23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 CERS3Q8IU89 383 aa23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 PALD1Q9ULE6 856 aa23.02■■□□□ 1.28
HMGB3P22-201ENST00000442010 NAV1Q8NEY1 1877 aa23.01■■□□□ 1.27
HMGB3P22-201ENST00000442010 FOXP4Q8IVH2 680 aaPredicted RBP23.01■■□□□ 1.27
HMGB3P22-201ENST00000442010 RIOK1Q9BRS2 568 aaKnown RBP23.01■■□□□ 1.27
HMGB3P22-201ENST00000442010 ATP5JP18859 108 aa23■■□□□ 1.27
HMGB3P22-201ENST00000442010 SOX10P56693 466 aa23■■□□□ 1.27
HMGB3P22-201ENST00000442010 FASTKD5Q7L8L6 764 aaKnown RBP23■■□□□ 1.27
HMGB3P22-201ENST00000442010 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
HMGB3P22-201ENST00000442010 DCTPP1Q9H773 170 aa23■■□□□ 1.27
HMGB3P22-201ENST00000442010 KIAA0100Q14667 2235 aaKnown RBP23■■□□□ 1.27
HMGB3P22-201ENST00000442010 GOLIM4O00461 696 aa22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 PDE6AP16499 860 aa22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 LACTBP83111 547 aaPredicted RBP22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 EDC3Q96F86 508 aaKnown RBP22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 DNAJC2Q99543 621 aaKnown RBP22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 ARHGAP39Q9C0H5 1083 aa22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 RBBP6Q7Z6E9 1792 aaKnown RBP22.99■■□□□ 1.27
HMGB3P22-201ENST00000442010 TCRBV5S4A2TA0A5A2 114 aa22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 TRIM75PA6NK02 468 aa22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 SMARCA5O60264 1052 aaPredicted RBP22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 RRP1P56182 461 aaKnown RBP22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 JAG1P78504 1218 aa22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 MLLT1Q03111 559 aaPredicted RBP22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 BOLA2Q9H3K6 86 aa22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 SAP30BPQ9UHR5 308 aaKnown RBP22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 CPA4Q9UI42 421 aa22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 SLC45A1Q9Y2W3 748 aa22.98■■□□□ 1.27
HMGB3P22-201ENST00000442010 CTGFP29279 349 aa22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 SLC9C2Q5TAH2 1124 aa22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 PARK7Q99497 189 aaKnown RBP22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 HAUS7Q99871 368 aa22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 TBC1D2Q9BYX2 928 aa22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 BCL11AQ9H165 835 aa22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 DOCK3Q8IZD9 2030 aa22.97■■□□□ 1.27
HMGB3P22-201ENST00000442010 CYP2C8P10632 490 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 BCRP11274 1271 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 SPP2Q13103 211 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 ARHGEF6Q15052 776 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 GADL1Q6ZQY3 521 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 ZNF280CQ8ND82 737 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 PAG1Q9NWQ8 432 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 ZNF532Q9HCE3 1301 aa22.96■■□□□ 1.27
HMGB3P22-201ENST00000442010 MAGEB6P1A0A0J9YX57 407 aa22.95■■□□□ 1.26
HMGB3P22-201ENST00000442010 USP17L5A8MUK1 530 aa22.95■■□□□ 1.26
HMGB3P22-201ENST00000442010 USP5P45974 858 aa22.95■■□□□ 1.26
HMGB3P22-201ENST00000442010 BAZ2AQ9UIF9 1905 aaKnown RBP22.95■■□□□ 1.26
HMGB3P22-201ENST00000442010 HLA-DOAP06340 250 aa22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 SHROOM1Q2M3G4 852 aaPredicted RBP22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 CRACR2BQ8N4Y2 399 aaPredicted RBP22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 PROCA1Q8NCQ7 364 aaPredicted RBP22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 ARMC5Q96C12 935 aa22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 WDR18Q9BV38 432 aa22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 EHD4Q9H223 541 aa22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 AGTPBP1Q9UPW5 1226 aa22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 TNRC18O15417 2968 aaPredicted RBP22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 BRCA2P51587 3418 aa22.94■■□□□ 1.26
HMGB3P22-201ENST00000442010 PDE4DIPQ5VU43 2346 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 GNRH1P01148 92 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 ASNSP08243 561 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 ADD2P35612 726 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 KIF22Q14807 665 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 SLC4A8Q2Y0W8 1093 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 SH3D19Q5HYK7 790 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 TREML2Q5T2D2 321 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 TATDN1Q6P1N9 297 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 GINM1Q9NU53 330 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 PTCH2Q9Y6C5 1203 aa22.93■■□□□ 1.26
HMGB3P22-201ENST00000442010 MYH8P13535 1937 aa22.92■■□□□ 1.26
HMGB3P22-201ENST00000442010 SLFNL1Q499Z3 407 aa22.92■■□□□ 1.26
HMGB3P22-201ENST00000442010 AS3MTQ9HBK9 375 aa22.92■■□□□ 1.26
HMGB3P22-201ENST00000442010 GDF11O95390 407 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms