RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ZFYVE1Q9HBF4 777 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 MBNL3Q9NUK0 354 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 ADAMTS6Q9UKP5 1117 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 RPS6KL1Q9Y6S9 549 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 RNASE1P07998 156 aaKnown RBP6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 CD8BP10966 210 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 FUT4P22083 530 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 ITPKAP23677 461 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 CD96P40200 585 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 ECM1Q16610 540 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 HSP90AB3PQ58FF7 597 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 KRBA2Q6ZNG9 492 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 FAM181AQ8N9Y4 354 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 KRTAP4-2Q9BYR5 136 aa6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 FEZ2Q9UHY8 353 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P9-201ENST00000441799 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 TMPRSS2O15393 492 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 FAM87AP0C7U9 286 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 LIG1P18858 919 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 CDK5R2Q13319 367 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 ZNF211Q13398 564 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 LONRF3Q496Y0 759 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 CYP27C1Q4G0S4 372 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 ATG4DQ86TL0 474 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 CRIM1Q9NZV1 1036 aa6.01□□□□□ -1.45
HMGB3P9-201ENST00000441799 ANKRD62A6NC57 917 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 EXOC5O00471 708 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 BIN1O00499 593 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 ANP32CO43423 234 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 HDAC1Q13547 482 aaPredicted RBP6□□□□□ -1.45
HMGB3P9-201ENST00000441799 PDE3AQ14432 1141 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 NETO1Q8TDF5 533 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 MISP3Q96FF7 219 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 CCDC86Q9H6F5 360 aaKnown RBP6□□□□□ -1.45
HMGB3P9-201ENST00000441799 DISC1Q9NRI5 854 aa6□□□□□ -1.45
HMGB3P9-201ENST00000441799 DBX1A6NMT0 343 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 CCER2I3L3R5 266 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 ZNF862O60290 1169 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 ABL1P00519 1130 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 FAAP100Q0VG06 881 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 FOXD4Q12950 439 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 FBLN7Q53RD9 439 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 SPOCD1Q6ZMY3 1216 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 DDX54Q8TDD1 881 aaKnown RBP5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 MORC4Q8TE76 937 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 FANCD2OSQ96PS1 177 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 HIRIP3Q9BW71 556 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 YY1AP1Q9H869 796 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 RC3H2Q9HBD1 1191 aaKnown RBP5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 MAGEC2Q9UBF1 373 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 VAV3Q9UKW4 847 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 PLAGL2Q9UPG8 496 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 PCDHGC5Q9Y5F6 944 aa5.99□□□□□ -1.45
HMGB3P9-201ENST00000441799 SMARCA2P51531 1590 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 BAZ1AQ9NRL2 1556 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 PPFIA4O75335 1185 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 LEFTY1O75610 366 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 FARP2O94887 1054 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 ZRANB2O95218 330 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 CYB5RLQ6IPT4 315 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 FAM43AQ8N2R8 423 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 MSL3Q8N5Y2 521 aaKnown RBP5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 LRRN4CLQ8ND94 238 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 FAM168AQ92567 244 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 ZC3H12CQ9C0D7 883 aaKnown RBP5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 EHD4Q9H223 541 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 ABCB6Q9NP58 842 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 RIMBP3CA6NJZ7 1639 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 RIMBP3BA6NNM3 1639 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 RIMBP3Q9UFD9 1639 aa5.98□□□□□ -1.45
HMGB3P9-201ENST00000441799 UNCXA6NJT0 531 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 RGS3P49796 1198 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 ZNF157P51786 506 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 OXCT1P55809 520 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 PRKCQQ04759 706 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 PTPN12Q05209 780 aaKnown RBP5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 SLC20A2Q08357 652 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 MTA1Q13330 715 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 AP3B2Q13367 1082 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 ORC1Q13415 861 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 WDR78Q5VTH9 848 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 TAF3Q5VWG9 929 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 ANKRD23Q86SG2 305 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 SMC5Q8IY18 1101 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 RETREG2Q8NC44 543 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 CXorf38Q8TB03 319 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 MICAL1Q8TDZ2 1067 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 TMEM40Q8WWA1 233 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 NPHS2Q9NP85 383 aa5.97□□□□□ -1.45
HMGB3P9-201ENST00000441799 ICMTO60725 284 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 ID3Q02535 119 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 MESP2Q0VG99 397 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 RPS26P11Q5JNZ5 115 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 UTP14CQ5TAP6 766 aaKnown RBP5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 NBPF6Q5VWK0 638 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 CLEC4GQ6UXB4 293 aa5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 NBPF5PQ86XG9 351 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P9-201ENST00000441799 SMYD4Q8IYR2 804 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms