RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NEDD4P46934 1319 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 USP5P45974 858 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 HAUS7Q99871 368 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 FANCLQ9NW38 375 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 RAB21Q9UL25 225 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 CTDNEP1O95476 244 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 HMG20BQ9P0W2 317 aa19.13■□□□□ 0.65
PMS1-213ENST00000441310 A0A0U1RQJ8 604 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 IKBKBO14920 756 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 TDO2P48775 406 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 MYL5Q02045 173 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 ATRIPQ8WXE1 791 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 POTEB2H3BUK9 544 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 IFIT1P09914 478 aaKnown RBP19.12■□□□□ 0.65
PMS1-213ENST00000441310 CCT5P48643 541 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 KIF4BQ2VIQ3 1234 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 PI16Q6UXB8 463 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 CEP112Q8N8E3 955 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 MSANTD4Q8NCY6 345 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 PAG1Q9NWQ8 432 aa19.12■□□□□ 0.65
PMS1-213ENST00000441310 A0A0G2JLW4 131 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 CYP19A1P11511 503 aaPredicted RBP19.11■□□□□ 0.65
PMS1-213ENST00000441310 CDC23Q9UJX2 597 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 ZNF609O15014 1411 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 TNS2Q63HR2 1409 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 ACBD3Q9H3P7 528 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 INTS13Q9NVM9 706 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 TRMT112Q9UI30 125 aaKnown RBP19.11■□□□□ 0.65
PMS1-213ENST00000441310 TAOK2Q9UL54 1235 aa19.11■□□□□ 0.65
PMS1-213ENST00000441310 KCNV1Q6PIU1 500 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
PMS1-213ENST00000441310 A0A1W2PQ27 194 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 A0A1W2PQ64 194 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 A0A1W2PQD8 194 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 STX10O60499 249 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 IFIT5Q13325 482 aaKnown RBP19.1■□□□□ 0.65
PMS1-213ENST00000441310 KRT32Q14532 448 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 KBTBD3Q8NAB2 608 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 LINC00301Q8NCQ3 95 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 RIN2Q8WYP3 895 aaPredicted RBP19.1■□□□□ 0.65
PMS1-213ENST00000441310 GREM2Q9H772 168 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 ABCA3Q99758 1704 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 MAP3K15Q6ZN16 1313 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 MED23Q9ULK4 1368 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 GIGYF2Q6Y7W6 1299 aaKnown RBP19.1■□□□□ 0.65
PMS1-213ENST00000441310 TC2NQ8N9U0 490 aa19.1■□□□□ 0.65
PMS1-213ENST00000441310 MCMDC2Q4G0Z9 681 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 ZNF569Q5MCW4 686 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 ATL3Q6DD88 541 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 MED4Q9NPJ6 270 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 PFKFB2O60825 505 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 NLRP10Q86W26 655 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 RTEL1Q9NZ71 1219 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 TOGARAM1Q9Y4F4 1720 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 FAM169AQ9Y6X4 670 aa19.09■□□□□ 0.65
PMS1-213ENST00000441310 SPTLC2O15270 562 aa19.08■□□□□ 0.65
PMS1-213ENST00000441310 PFKFB1P16118 471 aa19.08■□□□□ 0.65
PMS1-213ENST00000441310 KCNQ4P56696 695 aa19.08■□□□□ 0.65
PMS1-213ENST00000441310 SCARF1Q14162 830 aa19.08■□□□□ 0.65
PMS1-213ENST00000441310 HELBQ8NG08 1087 aaPredicted RBP19.08■□□□□ 0.65
PMS1-213ENST00000441310 SMARCC1Q92922 1105 aaPredicted RBP19.08■□□□□ 0.65
PMS1-213ENST00000441310 GDAP1L1Q96MZ0 367 aa19.08■□□□□ 0.65
PMS1-213ENST00000441310 SHANK3Q9BYB0 1731 aa19.08■□□□□ 0.65
PMS1-213ENST00000441310 SOWAHDA6NJG2 315 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 LDHAL6AQ6ZMR3 332 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 DZIP3Q86Y13 1208 aaKnown RBP19.08■□□□□ 0.64
PMS1-213ENST00000441310 ZBTB38Q8NAP3 1195 aaPredicted RBP19.08■□□□□ 0.64
PMS1-213ENST00000441310 LLPHQ9BRT6 129 aaKnown RBP19.08■□□□□ 0.64
PMS1-213ENST00000441310 RAI14Q9P0K7 980 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 CCDC196A0A1B0GTZ2 297 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 PCCAP05165 728 aaPredicted RBP19.08■□□□□ 0.64
PMS1-213ENST00000441310 DDB1Q16531 1140 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 XAGE2Q96GT9 111 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 FAM107BQ9H098 131 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
PMS1-213ENST00000441310 LAMB4A4D0S4 1761 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 KIF5CO60282 957 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 CYP21A2P08686 494 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 CCDC175P0C221 793 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 ITGA6P23229 1130 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 PNOCQ13519 176 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 IGSF22Q8N9C0 903 aa19.07■□□□□ 0.64
PMS1-213ENST00000441310 JPH2Q9BR39 696 aaPredicted RBP19.07■□□□□ 0.64
PMS1-213ENST00000441310 KIF1CO43896 1103 aaKnown RBP19.07■□□□□ 0.64
PMS1-213ENST00000441310 MARCKSP29966 332 aaPredicted RBP19.07■□□□□ 0.64
PMS1-213ENST00000441310 SNAP23O00161 211 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 IRS4O14654 1257 aaPredicted RBP19.06■□□□□ 0.64
PMS1-213ENST00000441310 SYF2O95926 243 aaKnown RBP19.06■□□□□ 0.64
PMS1-213ENST00000441310 METTL24Q5JXM2 366 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 TTC39AQ5SRH9 613 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 MSL3Q8N5Y2 521 aaKnown RBP19.06■□□□□ 0.64
PMS1-213ENST00000441310 NOA1Q8NC60 698 aaKnown RBP19.06■□□□□ 0.64
PMS1-213ENST00000441310 EBAG9O00559 213 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 USP8P40818 1118 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 WASHC4Q2M389 1173 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 OLFM4Q6UX06 510 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 CHST3Q7LGC8 479 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 EHD4Q9H223 541 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 CNNM1Q9NRU3 951 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms