RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ERICH2A1L162 156 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 SLU7O95391 586 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 CYP7A1P22680 504 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 FMR1Q06787 632 aaKnown RBP eCLIP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 MYO5AQ9Y4I1 1855 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 TOP1P11387 765 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 IFNAR1P17181 557 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 CDK11BP21127 795 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 GYG1P46976 350 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 SMIM5Q71RC9 77 aa15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-204ENST00000439977 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 KRT23Q9C075 422 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 INTS13Q9NVM9 706 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 RAI14Q9P0K7 980 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 VPS54Q9P1Q0 977 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 AKAP11Q9UKA4 1901 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 ADKP55263 362 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 EVX2Q03828 476 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 DMTNQ08495 405 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 SLC4A8Q2Y0W8 1093 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 UBAC1Q9BSL1 405 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 MAN1B1Q9UKM7 699 aa15.56■□□□□ 0.08
HERPUD1-204ENST00000439977 COBLO75128 1261 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 SART3Q15020 963 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 POSTNQ15063 836 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 ALX1Q15699 326 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 CRACR2BQ8N4Y2 399 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 FANCBQ8NB91 859 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 NIP7Q9Y221 180 aaKnown RBP eCLIP15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 NFE2L3Q9Y4A8 694 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 NRDCO43847 1150 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 AFMP43652 599 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 KCNQ4P56696 695 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 CHRNDQ07001 517 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 EARS2Q5JPH6 523 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 KLHL10Q6JEL2 608 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 ZNF654Q8IZM8 581 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 ERO1AQ96HE7 468 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 CNNM2Q9H8M5 875 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 FBXO2Q9UK22 296 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 BCL9O00512 1426 aa15.55■□□□□ 0.08
HERPUD1-204ENST00000439977 FANCGO15287 622 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 MDM2Q00987 491 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 SYCP1Q15431 976 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 NOM1Q5C9Z4 860 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 STAMQ92783 540 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 SHISA4Q96DD7 197 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 CSRNP2Q9H175 543 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 SAMSN1Q9NSI8 373 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 OGFRQ9NZT2 677 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 ATRNO75882 1429 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 IGHMBP2P38935 993 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 DYNLL1P63167 89 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 PPARAQ07869 468 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 EPSTI1Q96J88 318 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 FEZ1Q99689 392 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 DDX41Q9UJV9 622 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 ERVV-1B6SEH8 477 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 STX17P56962 302 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 VSTM4Q8IW00 320 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 DHX58Q96C10 678 aa15.54■□□□□ 0.08
HERPUD1-204ENST00000439977 TNKSO95271 1327 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 WNT7AO00755 349 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 URI1O94763 535 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 INTS5Q6P9B9 1019 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 STAG1Q8WVM7 1258 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 EPC1Q9H2F5 836 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 ST7Q9NRC1 585 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 PTPREP23469 700 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 EIF5P55010 431 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 SMYD4Q8IYR2 804 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 ZNF397Q8NF99 534 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 WASF1Q92558 559 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 SMARCE1Q969G3 411 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 MED15Q96RN5 788 aa15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
HERPUD1-204ENST00000439977 ETF1P62495 437 aaKnown RBP15.52■□□□□ 0.08
HERPUD1-204ENST00000439977 JAG2Q9Y219 1238 aa15.52■□□□□ 0.08
HERPUD1-204ENST00000439977 PAPPAQ13219 1627 aa15.52■□□□□ 0.08
HERPUD1-204ENST00000439977 FAM237AA0A1B0GTK4 181 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 CBFA2T2O43439 604 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 PLEKHA8P1O95397 391 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 DEXIO95424 95 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 CCDC152Q4G0S7 254 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 RILPL1Q5EBL4 403 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 CPLX3Q8WVH0 158 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 DESI2Q9BSY9 194 aa15.52■□□□□ 0.07
HERPUD1-204ENST00000439977 SLIT2O94813 1529 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 A0A087X0B3 334 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 C3orf67Q6ZVT6 689 aa15.51■□□□□ 0.07
HERPUD1-204ENST00000439977 C4AP0C0L4 1744 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms