RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CRAMP1Q96RY5 1269 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 CRBNQ96SW2 442 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 SYT17Q9BSW7 474 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 BICC1Q9H694 974 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 LRRFIP2Q9Y608 721 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 NRXN2Q9P2S2 1712 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 LRP5O75197 1615 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 KLRG2A4D1S0 409 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 FIGNL2A6NMB9 653 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 TTLL8A6PVC2 850 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 SPINT1O43278 529 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 HMMRO75330 724 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 SOX11P35716 441 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 PTGIRP43119 386 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 ERVK-9P63128 1117 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 FOXO4P98177 505 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 GRAPQ13588 217 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 CRY2Q49AN0 593 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 DALRD3Q5D0E6 543 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 NLGN2Q8NFZ4 835 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 GRAPLQ8TC17 118 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 INSM2Q96T92 566 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 MPHOSPH8Q99549 860 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 WWC3Q9ULE0 1092 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 BCS1LQ9Y276 419 aa7.6□□□□□ -1.19
ECHDC1-208ENST00000436638 BBOX1O75936 387 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 MYCP01106 439 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 CSF1RP07333 972 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 ITGA6P23229 1130 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 HOXA10P31260 410 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 SCTRP47872 440 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 RPS8P62241 208 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 GPR162Q16538 588 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 RABL6Q3YEC7 729 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 EPHA10Q5JZY3 1008 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 SOGA3Q5TF21 947 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 TMC4Q7Z404 712 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 GZF1Q9H116 711 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 GREM2Q9H772 168 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 DOLKQ9UPQ8 538 aa7.59□□□□□ -1.19
ECHDC1-208ENST00000436638 N4BP2Q86UW6 1770 aaPredicted RBP7.59□□□□□ -1.2
ECHDC1-208ENST00000436638 SRGAP3O43295 1099 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 ATP8B2P98198 1209 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 PRPF40BQ6NWY9 871 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 LDHAL6AQ6ZMR3 332 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 RPAP2Q8IXW5 612 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 PHTF2Q8N3S3 785 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 ANKRD44Q8N8A2 993 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 CNNM1Q9NRU3 951 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 ZBTB40Q9NUA8 1239 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 DNMT3LQ9UJW3 386 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 RTL9Q8NET4 1388 aa7.58□□□□□ -1.2
ECHDC1-208ENST00000436638 LAMB2P55268 1798 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 A6NJR5 290 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 POM121CA8CG34 1229 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 MEN1O00255 615 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 C21orf2O43822 256 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 KCNA3P22001 575 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 G3BP1Q13283 466 aaKnown RBP eCLIP7.57□□□□□ -1.21e-11■■■□□ 15.6
ECHDC1-208ENST00000436638 OS9Q13438 667 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 CCDC93Q567U6 631 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 OXLD1Q5BKU9 147 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 CYP2U1Q7Z449 544 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 EXOC6Q8TAG9 804 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 CELF1Q92879 486 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 KAZALD1Q96I82 304 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 NXF1Q9UBU9 619 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 DDX60Q8IY21 1712 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 TNRC6CQ9HCJ0 1690 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 KIF13BQ9NQT8 1826 aa7.57□□□□□ -1.2
ECHDC1-208ENST00000436638 TERTO14746 1132 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 GRIN3BO60391 1043 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 SURF6O75683 361 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 KCNJ4P48050 445 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 VEGFBP49765 207 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 FAM193AP78312 1265 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 USP4Q13107 963 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 MTX1Q13505 466 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 CEP85Q6P2H3 762 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 FAM43BQ6ZT52 329 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ARHGAP27Q6ZUM4 889 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 SP8Q8IXZ3 490 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 RTKN2Q8IZC4 609 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 SUPT20HQ8NEM7 779 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ZNF594Q96JF6 807 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ANKRD2Q9GZV1 360 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 OSBPL3Q9H4L5 887 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ALG2Q9H553 416 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ANKIB1Q9P2G1 1089 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 NSFL1CQ9UNZ2 370 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 ATP6V0A2Q9Y487 856 aa7.56□□□□□ -1.2
ECHDC1-208ENST00000436638 MYH3P11055 1940 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms