RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PDS5AQ29RF7 1337 aaKnown RBP12□□□□□ -0.49
CD44-210ENST00000434472 SHC4Q6S5L8 630 aa12□□□□□ -0.49
CD44-210ENST00000434472 DIS3L2Q8IYB7 885 aaKnown RBP12□□□□□ -0.49
CD44-210ENST00000434472 FANCBQ8NB91 859 aa12□□□□□ -0.49
CD44-210ENST00000434472 MYL10Q9BUA6 226 aa12□□□□□ -0.49
CD44-210ENST00000434472 BRIP1Q9BX63 1249 aa12□□□□□ -0.49
CD44-210ENST00000434472 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
CD44-210ENST00000434472 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
CD44-210ENST00000434472 SNAP23O00161 211 aa12□□□□□ -0.49
CD44-210ENST00000434472 IGSF3O75054 1194 aa12□□□□□ -0.49
CD44-210ENST00000434472 SMC2O95347 1197 aa12□□□□□ -0.49
CD44-210ENST00000434472 KCNJ6P48051 423 aa12□□□□□ -0.49
CD44-210ENST00000434472 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
CD44-210ENST00000434472 SLC10A5Q5PT55 438 aa12□□□□□ -0.49
CD44-210ENST00000434472 KANK3Q6NY19 840 aa12□□□□□ -0.49
CD44-210ENST00000434472 KRBA2Q6ZNG9 492 aa12□□□□□ -0.49
CD44-210ENST00000434472 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
CD44-210ENST00000434472 NBPF11Q86T75 865 aa12□□□□□ -0.49
CD44-210ENST00000434472 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
CD44-210ENST00000434472 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
CD44-210ENST00000434472 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
CD44-210ENST00000434472 FBXW7Q969H0 707 aa12□□□□□ -0.49
CD44-210ENST00000434472 RNF26Q9BY78 433 aaPredicted RBP12□□□□□ -0.49
CD44-210ENST00000434472 INCENPQ9NQS7 918 aa12□□□□□ -0.49
CD44-210ENST00000434472 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
CD44-210ENST00000434472 DACH1Q9UI36 760 aa12□□□□□ -0.49
CD44-210ENST00000434472 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
CD44-210ENST00000434472 ZBTB22O15209 634 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 CTIFO43310 598 aaKnown RBP11.99□□□□□ -0.49
CD44-210ENST00000434472 ADAMTS2O95450 1211 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 TUBB4AP04350 444 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 NT5C2P49902 561 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 MYL5Q02045 173 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 MIGA1Q8NAN2 632 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 CCDC34Q96HJ3 373 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
CD44-210ENST00000434472 CNTNAP4Q9C0A0 1308 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 A0A087WWV3 80 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 BIN1O00499 593 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 BMP15O95972 392 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 PTPREP23469 700 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 CCZ1BP86790 482 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 CCZ1P86791 482 aaPredicted RBP11.98□□□□□ -0.49
CD44-210ENST00000434472 FANCCQ00597 558 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 NCAPHQ15003 741 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 SEC23AQ15436 765 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 PTPN14Q15678 1187 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 CEP135Q66GS9 1140 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 C16orf45Q96MC5 204 aaPredicted RBP11.98□□□□□ -0.49
CD44-210ENST00000434472 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
CD44-210ENST00000434472 XPO4Q9C0E2 1151 aaKnown RBP11.98□□□□□ -0.49
CD44-210ENST00000434472 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 IFNKQ9P0W0 207 aa11.98□□□□□ -0.49
CD44-210ENST00000434472 COL5A3P25940 1745 aaPredicted RBP11.98□□□□□ -0.49
CD44-210ENST00000434472 TNKSO95271 1327 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 MINDY4BA8MYZ0 360 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 BTBD18B2RXH4 712 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 CCP110O43303 1012 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 CATIPQ7Z7H3 387 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 CCDC112Q8NEF3 446 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 FBXO2Q9UK22 296 aaPredicted RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 MINPP1Q9UNW1 487 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 PRPF3O43395 683 aaKnown RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 DDAH1O94760 285 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 FGRP09769 529 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 SFPQP23246 707 aaKnown RBP eCLIP11.97□□□□□ -0.49
CD44-210ENST00000434472 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 GYG1P46976 350 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 FBXO33Q7Z6M2 555 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 IQCA1Q86XH1 822 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 TRIML1Q8N9V2 468 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 CLIC6Q96NY7 704 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 BRMS1Q9HCU9 246 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
CD44-210ENST00000434472 SRPRBQ9Y5M8 271 aaKnown RBP11.97□□□□□ -0.49
CD44-210ENST00000434472 MYH14Q7Z406 1995 aaKnown RBP11.96□□□□□ -0.49
CD44-210ENST00000434472 ORC4O43929 436 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 GUCY1A2P33402 732 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 TOB1P50616 345 aaPredicted RBP11.96□□□□□ -0.5
CD44-210ENST00000434472 PNOCQ13519 176 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 ARID5BQ14865 1188 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 LONRF3Q496Y0 759 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 CT47A1Q5JQC4 288 aaPredicted RBP11.96□□□□□ -0.5
CD44-210ENST00000434472 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.5
CD44-210ENST00000434472 NYAP1Q6ZVC0 841 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 METTL16Q86W50 562 aaKnown RBP11.96□□□□□ -0.5
CD44-210ENST00000434472 CCAR2Q8N163 923 aaKnown RBP11.96□□□□□ -0.5
CD44-210ENST00000434472 STK11IPQ8N1F8 1099 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 MLKLQ8NB16 471 aa11.96□□□□□ -0.5
CD44-210ENST00000434472 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms