RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 GNAT2P19087 354 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 PDE4BQ07343 736 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 HSP90AA4PQ58FG1 418 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 INTS5Q6P9B9 1019 aaKnown RBP13.57□□□□□ -0.24
CD44-209ENST00000433892 CRACR2BQ8N4Y2 399 aaPredicted RBP13.57□□□□□ -0.24
CD44-209ENST00000433892 PNPLA7Q6ZV29 1317 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 PSDA5PKW4 1024 aaPredicted RBP13.57□□□□□ -0.24
CD44-209ENST00000433892 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
CD44-209ENST00000433892 NRDCO43847 1150 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 ATP2B1P20020 1258 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
CD44-209ENST00000433892 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
CD44-209ENST00000433892 GOLGA8FQ08AF8 430 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 GOLGA8DPQ0D2H9 430 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 MINDY4BA8MYZ0 360 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 SMIM22K7EJ46 135 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
CD44-209ENST00000433892 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 SDR42E1Q8WUS8 393 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 PKNOX2Q96KN3 472 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 FEZ1Q99689 392 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
CD44-209ENST00000433892 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
CD44-209ENST00000433892 PCDHB6Q9Y5E3 794 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 CHD4Q14839 1912 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 DEXIO95424 95 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 CYP7A1P22680 504 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 PTPREP23469 700 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 CRKLP46109 303 aaKnown RBP13.56□□□□□ -0.24
CD44-209ENST00000433892 CHRNDQ07001 517 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 RILPL1Q5EBL4 403 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 ABCF2Q9UG63 623 aa13.56□□□□□ -0.24
CD44-209ENST00000433892 NID2Q14112 1375 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 NPHP1O15259 732 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 SLU7O95391 586 aaKnown RBP13.55□□□□□ -0.24
CD44-209ENST00000433892 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 KCNJ6P48051 423 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 PPARAQ07869 468 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
CD44-209ENST00000433892 POSTNQ15063 836 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 ELF2Q15723 593 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 PDILTQ8N807 584 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 SERTAD1Q9UHV2 236 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 MAN1B1Q9UKM7 699 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 PRDM4Q9UKN5 801 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
CD44-209ENST00000433892 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 CCDC196A0A1B0GTZ2 297 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 WTIPA6NIX2 430 aaPredicted RBP13.55□□□□□ -0.24
CD44-209ENST00000433892 CAMTA2O94983 1202 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 VSTM4Q8IW00 320 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 TMTC2Q8N394 836 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 ACSBG1Q96GR2 724 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
CD44-209ENST00000433892 CABP5Q9NP86 173 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
CD44-209ENST00000433892 TIAM2Q8IVF5 1701 aa13.55□□□□□ -0.24
CD44-209ENST00000433892 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
CD44-209ENST00000433892 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
CD44-209ENST00000433892 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
CD44-209ENST00000433892 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
CD44-209ENST00000433892 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
CD44-209ENST00000433892 TNKSO95271 1327 aa13.54□□□□□ -0.24
CD44-209ENST00000433892 NTSR2O95665 410 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
CD44-209ENST00000433892 DMTNQ08495 405 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 RAI14Q9P0K7 980 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 GYG1P46976 350 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
CD44-209ENST00000433892 LRRN4CLQ8ND94 238 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 SHISA4Q96DD7 197 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 L2HGDHQ9H9P8 463 aa13.53□□□□□ -0.24
CD44-209ENST00000433892 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
CD44-209ENST00000433892 SRPRBQ9Y5M8 271 aaKnown RBP13.53□□□□□ -0.24
CD44-209ENST00000433892 MAGEB6P1A0A0J9YX57 407 aa13.52□□□□□ -0.24
CD44-209ENST00000433892 FAM205CA6NFA0 338 aa13.52□□□□□ -0.24
CD44-209ENST00000433892 ELOA2Q8IYF1 753 aaPredicted RBP13.52□□□□□ -0.24
CD44-209ENST00000433892 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.24
CD44-209ENST00000433892 ESR2Q92731 530 aa13.52□□□□□ -0.24
CD44-209ENST00000433892 SMARCE1Q969G3 411 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms