RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 NUP133Q8WUM0 1156 aa5.44□□□□□ -1.54
UBE4A-202ENST00000431736 PRMT6Q96LA8 375 aaPredicted RBP5.44□□□□□ -1.54
UBE4A-202ENST00000431736 GLT1D1Q96MS3 346 aa5.44□□□□□ -1.54
UBE4A-202ENST00000431736 MXD3Q9BW11 206 aa5.44□□□□□ -1.54
UBE4A-202ENST00000431736 PTPN22Q9Y2R2 807 aa5.44□□□□□ -1.54
UBE4A-202ENST00000431736 GNL2Q13823 731 aaKnown RBP5.44□□□□□ -1.54
UBE4A-202ENST00000431736 OTOP1Q7RTM1 612 aa5.44□□□□□ -1.54
UBE4A-202ENST00000431736 EDC3Q96F86 508 aaKnown RBP5.44□□□□□ -1.54
UBE4A-202ENST00000431736 SRRDQ9UH36 339 aa5.44□□□□□ -1.54
UBE4A-202ENST00000431736 SCAF8Q9UPN6 1271 aaKnown RBP5.44□□□□□ -1.54
UBE4A-202ENST00000431736 CCL5P13501 91 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 ZNF76P36508 570 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SLC9C2Q5TAH2 1124 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 G2E3Q7L622 706 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 CPXCR1Q8N123 301 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 CHMP4CQ96CF2 233 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 PLEKHF1Q96S99 279 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 MMP19Q99542 508 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 CCDC8Q9H0W5 538 aaPredicted RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 C11orf49Q9H6J7 331 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SEC63Q9UGP8 760 aaKnown RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 IRS2Q9Y4H2 1338 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 COL1A1P02452 1464 aaPredicted RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SPDYE5A6NIY4 337 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 TFCP2Q12800 502 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SPOUT1Q5T280 376 aaKnown RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 MIGA1Q8NAN2 632 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 TRIM35Q9UPQ4 493 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 RIC1Q4ADV7 1423 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 TLR2O60603 784 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 VAMP4O75379 141 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 IGFBP4P22692 258 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 CCDC102BQ68D86 513 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 DHX37Q8IY37 1157 aaKnown RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 TSPYL6Q8N831 410 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 MTMR14Q8NCE2 650 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SERPINB13Q9UIV8 391 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 STX8Q9UNK0 236 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 POTEB2H3BUK9 544 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 GOLIM4O00461 696 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SLC25A27O95847 323 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 CHRDL2Q6WN34 429 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 PCSK9Q8NBP7 692 aaKnown RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 PROCA1Q8NCQ7 364 aaPredicted RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 C7orf43Q8WVR3 580 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 PPM1EQ8WY54 764 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 SSH1Q8WYL5 1049 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 ZKSCAN4Q969J2 545 aaPredicted RBP5.43□□□□□ -1.54
UBE4A-202ENST00000431736 TM4SF4P48230 202 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 ZDHHC15Q96MV8 337 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 PTCH2Q9Y6C5 1203 aa5.43□□□□□ -1.54
UBE4A-202ENST00000431736 BCAR3O75815 825 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 RSPH3Q86UC2 560 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 UPF2Q9HAU5 1272 aaKnown RBP5.42□□□□□ -1.54
UBE4A-202ENST00000431736 TMEM39AQ9NV64 488 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 COL18A1P39060 1754 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 YDJCA8MPS7 323 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 ATN1P54259 1190 aaPredicted RBP5.42□□□□□ -1.54
UBE4A-202ENST00000431736 DIXDC1Q155Q3 683 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 NSMFQ6X4W1 530 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 SH3TC2Q8TF17 1288 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 ARHGAP45Q92619 1136 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 RCAN3Q9UKA8 241 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 ZMYND8Q9ULU4 1186 aaPredicted RBP5.42□□□□□ -1.54
UBE4A-202ENST00000431736 IL1R1P14778 569 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 PDE4DQ08499 809 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 BEND3Q5T5X7 828 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 RNF20Q5VTR2 975 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 RPUSD2Q8IZ73 545 aaKnown RBP5.42□□□□□ -1.54
UBE4A-202ENST00000431736 MROH7-TTC4A0A0A0MT08 1334 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 PAPPAQ13219 1627 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 GDF11O95390 407 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 FDX1P10109 184 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 FLT3LGP49771 235 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 C3orf67Q6ZVT6 689 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 TMEM199Q8N511 208 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 FAM84BQ96KN1 310 aaPredicted RBP5.42□□□□□ -1.54
UBE4A-202ENST00000431736 SENP6Q9GZR1 1112 aaPredicted RBP5.42□□□□□ -1.54
UBE4A-202ENST00000431736 MROH7Q68CQ1 1323 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 FAM205AQ6ZU69 1335 aa5.42□□□□□ -1.54
UBE4A-202ENST00000431736 PTPDC1A2A3K4 754 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 NOP56O00567 594 aaKnown RBP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 INHAP05111 366 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 SRGAP2BP0DMP2 458 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 AGTPBP1Q9UPW5 1226 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 N4BP2Q86UW6 1770 aaPredicted RBP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 LACTBP83111 547 aaPredicted RBP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 DNAJC5GQ8N7S2 189 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 KAT14Q9H8E8 782 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 DAGLAQ9Y4D2 1042 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 RTL9Q8NET4 1388 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 ASB14A6NK59 587 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 MTMR2Q13614 643 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 TMEM179Q6ZVK1 233 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBE4A-202ENST00000431736 KANSL2Q9H9L4 492 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 FAM184BQ9ULE4 1060 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 SLC1A4P43007 532 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 CST9Q5W186 159 aa5.41□□□□□ -1.54
UBE4A-202ENST00000431736 MRPL50Q8N5N7 158 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms