RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CHD4Q14839 1912 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 MYH13Q9UKX3 1938 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 TEKT1Q969V4 418 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 ZNF804BA4D1E1 1349 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 CTAGE9A4FU28 777 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 CHRNDQ07001 517 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 PALLDQ8WX93 1383 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 MPNDQ8N594 471 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 MLKLQ8NB16 471 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 SKILP12757 684 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
PTCH1-208ENST00000430669 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 ZNF202O95125 648 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 DDX12PQ92771 950 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-208ENST00000430669 KRT13P13646 458 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 SEPT7Q16181 437 aaKnown RBP13.03□□□□□ -0.32
PTCH1-208ENST00000430669 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 FGAP02671 866 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
PTCH1-208ENST00000430669 NWD1Q149M9 1564 aa13.02□□□□□ -0.32
PTCH1-208ENST00000430669 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.32
PTCH1-208ENST00000430669 KDM3AQ9Y4C1 1321 aa13.02□□□□□ -0.32
PTCH1-208ENST00000430669 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.32
PTCH1-208ENST00000430669 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.32
PTCH1-208ENST00000430669 LMOD1P29536 600 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-208ENST00000430669 PTH1RQ03431 593 aa13.02□□□□□ -0.32
PTCH1-208ENST00000430669 CPA1P15085 419 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 PIGBQ92521 554 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 CPDO75976 1380 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 ISM2Q6H9L7 571 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 PICK1Q9NRD5 415 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 TUBBP07437 444 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTCH1-208ENST00000430669 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
PTCH1-208ENST00000430669 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-208ENST00000430669 ADD2P35612 726 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 MFSD14BQ5SR56 506 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 ZNF654Q8IZM8 581 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 VEZTQ9HBM0 779 aa13.02□□□□□ -0.33
PTCH1-208ENST00000430669 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
PTCH1-208ENST00000430669 TUBB2AQ13885 445 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 TCERG1LQ5VWI1 586 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 TUBB2BQ9BVA1 445 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 A0A1B0GVL5 298 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 DKC1O60832 514 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTCH1-208ENST00000430669 BBOX1O75936 387 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 FAM13AO94988 1023 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 RXRAP19793 462 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 NLRP12P59046 1061 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 CEP112Q8N8E3 955 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 LAD1O00515 517 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
PTCH1-208ENST00000430669 KRT86O43790 486 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 ZNF142P52746 1687 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-208ENST00000430669 ADCY7P51828 1080 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 POSTNQ15063 836 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 NUP58Q9BVL2 599 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
PTCH1-208ENST00000430669 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
PTCH1-208ENST00000430669 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
PTCH1-208ENST00000430669 TNFAIP1Q13829 316 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 CALCRLQ16602 461 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 HS2ST1Q7LGA3 356 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 LUZP1Q86V48 1076 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 H7C1W4 665 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
PTCH1-208ENST00000430669 LMBR1Q8WVP7 490 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 SCLT1Q96NL6 688 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 LMO7Q8WWI1 1683 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 ADRA2BP18089 450 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 CUL4AQ13619 759 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
PTCH1-208ENST00000430669 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
PTCH1-208ENST00000430669 BAZ2BQ9UIF8 2168 aaKnown RBP13□□□□□ -0.33
PTCH1-208ENST00000430669 UBXN1Q04323 297 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 TAF3Q5VWG9 929 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 NOSTRINQ8IVI9 506 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 NEK11Q8NG66 645 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 TPCN1Q9ULQ1 816 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
PTCH1-208ENST00000430669 ANKRD62A6NC57 917 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms