RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CXCL11O14625 94 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 SLURP2P0DP57 97 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 OTOP1Q7RTM1 612 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 ANKRD23Q86SG2 305 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 MIGA1Q8NAN2 632 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.37■■□□□ 1.01
NUP50-208ENST00000430547 PI4KBQ9UBF8 816 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 MYH7P12883 1935 aa21.37■■□□□ 1.01
NUP50-208ENST00000430547 PDHXO00330 501 aa21.36■■□□□ 1.01
NUP50-208ENST00000430547 TLR2O60603 784 aa21.36■■□□□ 1.01
NUP50-208ENST00000430547 USP5P45974 858 aa21.36■■□□□ 1.01
NUP50-208ENST00000430547 DYNLL1P63167 89 aaKnown RBP21.36■■□□□ 1.01
NUP50-208ENST00000430547 CRACR2BQ8N4Y2 399 aaPredicted RBP21.36■■□□□ 1.01
NUP50-208ENST00000430547 EFCC1Q9HA90 598 aa21.36■■□□□ 1.01
NUP50-208ENST00000430547 NAV1Q8NEY1 1877 aa21.35■■□□□ 1.01
NUP50-208ENST00000430547 GOLIM4O00461 696 aa21.35■■□□□ 1.01
NUP50-208ENST00000430547 HLA-DOAP06340 250 aa21.35■■□□□ 1.01
NUP50-208ENST00000430547 KIF22Q14807 665 aa21.35■■□□□ 1.01
NUP50-208ENST00000430547 FASTKD5Q7L8L6 764 aaKnown RBP21.35■■□□□ 1.01
NUP50-208ENST00000430547 RRP1P56182 461 aaKnown RBP21.34■■□□□ 1.01
NUP50-208ENST00000430547 GADL1Q6ZQY3 521 aa21.34■■□□□ 1.01
NUP50-208ENST00000430547 SAP30BPQ9UHR5 308 aaKnown RBP21.34■■□□□ 1.01
NUP50-208ENST00000430547 PALD1Q9ULE6 856 aa21.34■■□□□ 1.01
NUP50-208ENST00000430547 AFG3L2Q9Y4W6 797 aa21.34■■□□□ 1.01
NUP50-208ENST00000430547 A0A0G2JLL6 359 aaPredicted RBP21.33■■□□□ 1.01
NUP50-208ENST00000430547 TRIM75PA6NK02 468 aa21.33■■□□□ 1.01
NUP50-208ENST00000430547 SLC9C2Q5TAH2 1124 aa21.33■■□□□ 1.01
NUP50-208ENST00000430547 PRRT2Q7Z6L0 340 aaPredicted RBP21.33■■□□□ 1.01
NUP50-208ENST00000430547 PARK7Q99497 189 aaKnown RBP21.33■■□□□ 1.01
NUP50-208ENST00000430547 CAP2P40123 477 aa21.32■■□□□ 1
NUP50-208ENST00000430547 SOX10P56693 466 aa21.32■■□□□ 1
NUP50-208ENST00000430547 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
NUP50-208ENST00000430547 TBC1D2Q9BYX2 928 aa21.32■■□□□ 1
NUP50-208ENST00000430547 BOLA2Q9H3K6 86 aa21.32■■□□□ 1
NUP50-208ENST00000430547 PAG1Q9NWQ8 432 aa21.32■■□□□ 1
NUP50-208ENST00000430547 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.32■■□□□ 1
NUP50-208ENST00000430547 ZSWIM8A7E2V4 1837 aa21.32■■□□□ 1
NUP50-208ENST00000430547 MAGEB6P1A0A0J9YX57 407 aa21.31■■□□□ 1
NUP50-208ENST00000430547 PDE6AP16499 860 aa21.31■■□□□ 1
NUP50-208ENST00000430547 ATP5JP18859 108 aa21.31■■□□□ 1
NUP50-208ENST00000430547 MLLT1Q03111 559 aaPredicted RBP21.31■■□□□ 1
NUP50-208ENST00000430547 MOGSQ13724 837 aa21.31■■□□□ 1
NUP50-208ENST00000430547 SLC4A8Q2Y0W8 1093 aa21.31■■□□□ 1
NUP50-208ENST00000430547 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
NUP50-208ENST00000430547 AS3MTQ9HBK9 375 aa21.31■■□□□ 1
NUP50-208ENST00000430547 PTPN22Q9Y2R2 807 aa21.31■■□□□ 1
NUP50-208ENST00000430547 LOC285556D6RIA3 1793 aa21.31■■□□□ 1
NUP50-208ENST00000430547 SMARCA5O60264 1052 aaPredicted RBP21.3■■□□□ 1
NUP50-208ENST00000430547 GPATCH3Q96I76 525 aa21.3■■□□□ 1
NUP50-208ENST00000430547 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.3■■□□□ 1
NUP50-208ENST00000430547 CPA4Q9UI42 421 aa21.3■■□□□ 1
NUP50-208ENST00000430547 ZNF532Q9HCE3 1301 aa21.29■■□□□ 1
NUP50-208ENST00000430547 USP17L5A8MUK1 530 aa21.29■■□□□ 1
NUP50-208ENST00000430547 ASNSP08243 561 aa21.29■■□□□ 1
NUP50-208ENST00000430547 RGS19P49795 217 aa21.29■■□□□ 1
NUP50-208ENST00000430547 LACTBP83111 547 aaPredicted RBP21.29■■□□□ 1
NUP50-208ENST00000430547 GPAT2Q6NUI2 795 aa21.29■■□□□ 1
NUP50-208ENST00000430547 ZNF280CQ8ND82 737 aa21.29■■□□□ 1
NUP50-208ENST00000430547 EDC3Q96F86 508 aaKnown RBP21.29■■□□□ 1
NUP50-208ENST00000430547 HAUS7Q99871 368 aa21.29■■□□□ 1
NUP50-208ENST00000430547 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
NUP50-208ENST00000430547 DCTPP1Q9H773 170 aa21.29■■□□□ 1
NUP50-208ENST00000430547 DDX60LQ5H9U9 1706 aaKnown RBP21.29■■□□□ 1
NUP50-208ENST00000430547 MGAMO43451 1857 aa21.28■■□□□ 1
NUP50-208ENST00000430547 SPP2Q13103 211 aa21.28■■□□□ 1
NUP50-208ENST00000430547 C17orf99Q6UX52 265 aa21.28■■□□□ 1
NUP50-208ENST00000430547 TTC6Q86TZ1 520 aa21.28■■□□□ 1
NUP50-208ENST00000430547 RIOK1Q9BRS2 568 aaKnown RBP21.28■■□□□ 1
NUP50-208ENST00000430547 SLC45A1Q9Y2W3 748 aa21.28■■□□□ 1
NUP50-208ENST00000430547 MYH8P13535 1937 aa21.27■■□□□ 1
NUP50-208ENST00000430547 CYP2C8P10632 490 aa21.27■■□□□ 1
NUP50-208ENST00000430547 METTL16Q86W50 562 aaKnown RBP21.27■■□□□ 1
NUP50-208ENST00000430547 SMCR8Q8TEV9 937 aaPredicted RBP21.27■■□□□ 1
NUP50-208ENST00000430547 DNAJC18Q9H819 358 aa21.27■■□□□ 1
NUP50-208ENST00000430547 AGTPBP1Q9UPW5 1226 aa21.27■■□□□ 1
NUP50-208ENST00000430547 ECM2O94769 699 aaPredicted RBP21.26■□□□□ 0.99
NUP50-208ENST00000430547 GDF11O95390 407 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 GNRH1P01148 92 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
NUP50-208ENST00000430547 ZSCAN25Q6NSZ9 544 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 PROCA1Q8NCQ7 364 aaPredicted RBP21.26■□□□□ 0.99
NUP50-208ENST00000430547 ECHDC1Q9NTX5 307 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 GINM1Q9NU53 330 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 SERPINB13Q9UIV8 391 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 PNMA3Q9UL41 463 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 ADGRA2Q96PE1 1338 aa21.26■□□□□ 0.99
NUP50-208ENST00000430547 POLR3DP05423 398 aaPredicted RBP21.25■□□□□ 0.99
NUP50-208ENST00000430547 HMGCS2P54868 508 aa21.25■□□□□ 0.99
NUP50-208ENST00000430547 CAP1Q01518 475 aa21.25■□□□□ 0.99
NUP50-208ENST00000430547 PABPC4Q13310 644 aaKnown RBP eCLIP21.25■□□□□ 0.99
NUP50-208ENST00000430547 ARHGAP39Q9C0H5 1083 aa21.25■□□□□ 0.99
NUP50-208ENST00000430547 EHD4Q9H223 541 aa21.25■□□□□ 0.99
NUP50-208ENST00000430547 BAZ2AQ9UIF9 1905 aaKnown RBP21.25■□□□□ 0.99
NUP50-208ENST00000430547 TCRBV5S4A2TA0A5A2 114 aa21.24■□□□□ 0.99
NUP50-208ENST00000430547 ADD2P35612 726 aa21.24■□□□□ 0.99
NUP50-208ENST00000430547 CRBNQ96SW2 442 aa21.24■□□□□ 0.99
NUP50-208ENST00000430547 MCM9Q9NXL9 1143 aa21.24■□□□□ 0.99
NUP50-208ENST00000430547 ZBTB21Q9ULJ3 1066 aa21.24■□□□□ 0.99
NUP50-208ENST00000430547 PCDHB15Q9Y5E8 787 aa21.24■□□□□ 0.99
NUP50-208ENST00000430547 HTTP42858 3142 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms