RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SIRT2Q8IXJ6 389 aa20.98■□□□□ 0.95
CPSF4-203ENST00000430038 ANTXR1Q9H6X2 564 aa20.98■□□□□ 0.95
CPSF4-203ENST00000430038 PICK1Q9NRD5 415 aa20.98■□□□□ 0.95
CPSF4-203ENST00000430038 COL2A1P02458 1487 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-203ENST00000430038 TRIM75PA6NK02 468 aa20.97■□□□□ 0.95
CPSF4-203ENST00000430038 MYCP01106 439 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-203ENST00000430038 PSMC4P43686 418 aa20.97■□□□□ 0.95
CPSF4-203ENST00000430038 PPP4CP60510 307 aa20.97■□□□□ 0.95
CPSF4-203ENST00000430038 NAA16Q6N069 864 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-203ENST00000430038 GADL1Q6ZQY3 521 aa20.97■□□□□ 0.95
CPSF4-203ENST00000430038 DNAJC18Q9H819 358 aa20.97■□□□□ 0.95
CPSF4-203ENST00000430038 OSBPP22059 807 aa20.96■□□□□ 0.95
CPSF4-203ENST00000430038 TREML2Q5T2D2 321 aa20.96■□□□□ 0.95
CPSF4-203ENST00000430038 MAPKAPK5Q8IW41 473 aa20.96■□□□□ 0.95
CPSF4-203ENST00000430038 TGFBRAP1Q8WUH2 860 aa20.96■□□□□ 0.95
CPSF4-203ENST00000430038 MAP4K4O95819 1239 aaPredicted RBP20.95■□□□□ 0.94
CPSF4-203ENST00000430038 SLC9C1Q4G0N8 1177 aa20.95■□□□□ 0.94
CPSF4-203ENST00000430038 COG6Q9Y2V7 657 aa20.95■□□□□ 0.94
CPSF4-203ENST00000430038 MYH1P12882 1939 aa20.95■□□□□ 0.94
CPSF4-203ENST00000430038 CAP2P40123 477 aa20.94■□□□□ 0.94
CPSF4-203ENST00000430038 IL1RAPL2Q9NP60 686 aa20.94■□□□□ 0.94
CPSF4-203ENST00000430038 SRRDQ9UH36 339 aa20.94■□□□□ 0.94
CPSF4-203ENST00000430038 PALD1Q9ULE6 856 aa20.94■□□□□ 0.94
CPSF4-203ENST00000430038 LOC285556D6RIA3 1793 aa20.94■□□□□ 0.94
CPSF4-203ENST00000430038 SPP2Q13103 211 aa20.93■□□□□ 0.94
CPSF4-203ENST00000430038 KIF22Q14807 665 aa20.93■□□□□ 0.94
CPSF4-203ENST00000430038 ARHGEF6Q15052 776 aa20.93■□□□□ 0.94
CPSF4-203ENST00000430038 MTFR1Q15390 333 aa20.93■□□□□ 0.94
CPSF4-203ENST00000430038 FASTKD5Q7L8L6 764 aaKnown RBP20.93■□□□□ 0.94
CPSF4-203ENST00000430038 GABRQQ9UN88 632 aa20.93■□□□□ 0.94
CPSF4-203ENST00000430038 FLT1P17948 1338 aa20.93■□□□□ 0.94
CPSF4-203ENST00000430038 SLC4A8Q2Y0W8 1093 aa20.92■□□□□ 0.94
CPSF4-203ENST00000430038 AACSQ86V21 672 aa20.92■□□□□ 0.94
CPSF4-203ENST00000430038 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
CPSF4-203ENST00000430038 RHPN1Q8TCX5 695 aa20.92■□□□□ 0.94
CPSF4-203ENST00000430038 PARK7Q99497 189 aaKnown RBP20.92■□□□□ 0.94
CPSF4-203ENST00000430038 ZBTB40Q9NUA8 1239 aa20.92■□□□□ 0.94
CPSF4-203ENST00000430038 SLC34A2O95436 690 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 FMNL1O95466 1100 aaPredicted RBP20.91■□□□□ 0.94
CPSF4-203ENST00000430038 GNRH1P01148 92 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 CYP7A1P22680 504 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 C20orf194Q5TEA3 1177 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 PRPF38BQ5VTL8 546 aaKnown RBP20.91■□□□□ 0.94
CPSF4-203ENST00000430038 MIGA1Q8NAN2 632 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 PI4KBQ9UBF8 816 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 SAP30BPQ9UHR5 308 aaKnown RBP20.91■□□□□ 0.94
CPSF4-203ENST00000430038 SLC45A1Q9Y2W3 748 aa20.91■□□□□ 0.94
CPSF4-203ENST00000430038 IDH1O75874 414 aaKnown RBP20.9■□□□□ 0.94
CPSF4-203ENST00000430038 BAG3O95817 575 aa20.9■□□□□ 0.94
CPSF4-203ENST00000430038 PRKCZQ05513 592 aa20.9■□□□□ 0.94
CPSF4-203ENST00000430038 NBPF11Q86T75 865 aa20.9■□□□□ 0.94
CPSF4-203ENST00000430038 ZNF280CQ8ND82 737 aa20.9■□□□□ 0.94
CPSF4-203ENST00000430038 AGTPBP1Q9UPW5 1226 aa20.9■□□□□ 0.94
CPSF4-203ENST00000430038 APBB1O00213 710 aa20.89■□□□□ 0.93
CPSF4-203ENST00000430038 HMGCS2P54868 508 aa20.89■□□□□ 0.93
CPSF4-203ENST00000430038 MAGEB6Q8N7X4 407 aa20.89■□□□□ 0.93
CPSF4-203ENST00000430038 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
CPSF4-203ENST00000430038 MYPNQ86TC9 1320 aa20.88■□□□□ 0.93
CPSF4-203ENST00000430038 USP17L5A8MUK1 530 aa20.88■□□□□ 0.93
CPSF4-203ENST00000430038 PEX10O60683 326 aa20.88■□□□□ 0.93
CPSF4-203ENST00000430038 PRMT2P55345 433 aa20.88■□□□□ 0.93
CPSF4-203ENST00000430038 EVX2Q03828 476 aa20.88■□□□□ 0.93
CPSF4-203ENST00000430038 NOL10Q9BSC4 688 aaKnown RBP20.88■□□□□ 0.93
CPSF4-203ENST00000430038 TMEM106CQ9BVX2 250 aa20.88■□□□□ 0.93
CPSF4-203ENST00000430038 DHX36Q9H2U1 1008 aaKnown RBP20.88■□□□□ 0.93
CPSF4-203ENST00000430038 GDF11O95390 407 aa20.87■□□□□ 0.93
CPSF4-203ENST00000430038 PLCG2P16885 1265 aa20.87■□□□□ 0.93
CPSF4-203ENST00000430038 SH3D19Q5HYK7 790 aa20.87■□□□□ 0.93
CPSF4-203ENST00000430038 FOXP4Q8IVH2 680 aaPredicted RBP20.87■□□□□ 0.93
CPSF4-203ENST00000430038 ANKRD13CQ8N6S4 541 aa20.87■□□□□ 0.93
CPSF4-203ENST00000430038 SHISA4Q96DD7 197 aa20.87■□□□□ 0.93
CPSF4-203ENST00000430038 EDC3Q96F86 508 aaKnown RBP20.87■□□□□ 0.93
CPSF4-203ENST00000430038 RCAN3Q9UKA8 241 aa20.87■□□□□ 0.93
CPSF4-203ENST00000430038 PLXNB2O15031 1838 aa20.86■□□□□ 0.93
CPSF4-203ENST00000430038 GRK4P32298 578 aa20.86■□□□□ 0.93
CPSF4-203ENST00000430038 SLFNL1Q499Z3 407 aa20.86■□□□□ 0.93
CPSF4-203ENST00000430038 ERC1Q8IUD2 1116 aa20.86■□□□□ 0.93
CPSF4-203ENST00000430038 RPAP2Q8IXW5 612 aaPredicted RBP20.86■□□□□ 0.93
CPSF4-203ENST00000430038 PROCA1Q8NCQ7 364 aaPredicted RBP20.86■□□□□ 0.93
CPSF4-203ENST00000430038 FCGRTP55899 365 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 POTEEQ6S8J3 1075 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 RAET1EQ8TD07 263 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 RIOK1Q9BRS2 568 aaKnown RBP20.85■□□□□ 0.93
CPSF4-203ENST00000430038 WDR18Q9BV38 432 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 DDX19BQ9UMR2 479 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 CEP290O15078 2479 aa20.85■□□□□ 0.93
CPSF4-203ENST00000430038 DDX60LQ5H9U9 1706 aaKnown RBP20.84■□□□□ 0.93
CPSF4-203ENST00000430038 HOXD10P28358 340 aa20.84■□□□□ 0.93
CPSF4-203ENST00000430038 FLT3LGP49771 235 aa20.84■□□□□ 0.93
CPSF4-203ENST00000430038 MTMR2Q13614 643 aa20.84■□□□□ 0.93
CPSF4-203ENST00000430038 SMCR8Q8TEV9 937 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-203ENST00000430038 ASCC2Q9H1I8 757 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-203ENST00000430038 IGSF3O75054 1194 aa20.83■□□□□ 0.93
CPSF4-203ENST00000430038 CHGBP05060 677 aa20.83■□□□□ 0.93
CPSF4-203ENST00000430038 ELNP15502 786 aa20.83■□□□□ 0.93
CPSF4-203ENST00000430038 BACE1P56817 501 aa20.83■□□□□ 0.93
CPSF4-203ENST00000430038 ZBTB21Q9ULJ3 1066 aa20.83■□□□□ 0.93
CPSF4-203ENST00000430038 TCRBV5S4A2TA0A5A2 114 aa20.82■□□□□ 0.92
CPSF4-203ENST00000430038 MS4A1P11836 297 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms