RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 SLC5A6Q9Y289 635 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 PCDHB5Q9Y5E4 795 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 U3KQE9 123 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 NACADO15069 1562 aa8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 LIG3P49916 1009 aa8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 BNIP3Q12983 259 aa8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 CCDC27Q2M243 656 aa8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 CYFIP1Q7L576 1253 aa8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 BCL7CQ8WUZ0 217 aaPredicted RBP8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 PAK6Q9NQU5 681 aaPredicted RBP8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 SNCAIPQ9Y6H5 919 aa8.73□□□□□ -1.01
HMGB3P5-201ENST00000428894 CDK8P49336 464 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 OXCT1P55809 520 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 SEPT6Q14141 434 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 TAF1CQ15572 869 aaPredicted RBP8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 WIPI1Q5MNZ9 446 aaPredicted RBP8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 AGMOQ6ZNB7 445 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 TMC4Q7Z404 712 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 STK11IPQ8N1F8 1099 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 AGBL5Q8NDL9 886 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 WNT10AQ9GZT5 417 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 MKNK2Q9HBH9 465 aa8.72□□□□□ -1.01
HMGB3P5-201ENST00000428894 TAGLNQ01995 201 aaKnown RBP8.71□□□□□ -1.02
HMGB3P5-201ENST00000428894 ZNF574Q6ZN55 896 aaPredicted RBP8.71□□□□□ -1.02
HMGB3P5-201ENST00000428894 FAM214BQ7L5A3 538 aa8.71□□□□□ -1.02
HMGB3P5-201ENST00000428894 MISP3Q96FF7 219 aa8.71□□□□□ -1.02
HMGB3P5-201ENST00000428894 HEXIM2Q96MH2 286 aaKnown RBP8.71□□□□□ -1.02
HMGB3P5-201ENST00000428894 CEACAM5P06731 702 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 CTSHP09668 335 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 IFI16Q16666 785 aaKnown RBP8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 ARMCX6Q7L4S7 300 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 SPRED2Q7Z698 418 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 FBRSQ9HAH7 460 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 GTF2IRD1Q9UHL9 959 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 PLAGL2Q9UPG8 496 aa8.7□□□□□ -1.02
HMGB3P5-201ENST00000428894 LRIG2O94898 1065 aa8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 ERCC3P19447 782 aa8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 TFE3P19532 575 aaPredicted RBP8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 ITIH2P19823 946 aa8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 MIR1-1HGQ9H1L0 117 aa8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 VAV3Q9UKW4 847 aa8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
HMGB3P5-201ENST00000428894 TMEM265A0A087WTH1 108 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 IGF2BP3O00425 579 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 PAX4O43316 350 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 SORBS3O60504 671 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 EOMESO95936 686 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 RLBP1P12271 317 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 ST13P50502 369 aaKnown RBP8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 PRKCQQ04759 706 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 SLBPQ14493 270 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 WFDC3Q8IUB2 231 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 NOC4LQ9BVI4 516 aaKnown RBP8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 TLR6Q9Y2C9 796 aa8.68□□□□□ -1.02
HMGB3P5-201ENST00000428894 GFRA2O00451 464 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 GRK4P32298 578 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 NKG7Q16617 165 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 AOC3Q16853 763 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 CBLL1Q75N03 491 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 HID1Q8IV36 788 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 JARID2Q92833 1246 aaPredicted RBP8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 HRASLS5Q96KN8 279 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
HMGB3P5-201ENST00000428894 SLITRK5O94991 958 aa8.66□□□□□ -1.02
HMGB3P5-201ENST00000428894 CD8BP10966 210 aa8.66□□□□□ -1.02
HMGB3P5-201ENST00000428894 CD96P40200 585 aa8.66□□□□□ -1.02
HMGB3P5-201ENST00000428894 PLCL1Q15111 1095 aa8.66□□□□□ -1.02
HMGB3P5-201ENST00000428894 VTI1BQ9UEU0 232 aa8.66□□□□□ -1.02
HMGB3P5-201ENST00000428894 CAP2P40123 477 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 TSNAXIP1Q2TAA8 658 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 MFSD2AQ8NA29 543 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 PHC3Q8NDX5 983 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 MIPEPQ99797 713 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 TNKS2Q9H2K2 1166 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 PRDM5Q9NQX1 630 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 SNX11Q9Y5W9 270 aa8.65□□□□□ -1.02
HMGB3P5-201ENST00000428894 GNAT3A8MTJ3 354 aa8.64□□□□□ -1.03
HMGB3P5-201ENST00000428894 F6X3S4 739 aa8.64□□□□□ -1.03
HMGB3P5-201ENST00000428894 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
HMGB3P5-201ENST00000428894 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
HMGB3P5-201ENST00000428894 CST3P01034 146 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P5-201ENST00000428894 FUT4P22083 530 aa8.63□□□□□ -1.03
HMGB3P5-201ENST00000428894 RPL6Q02878 288 aaKnown RBP8.63□□□□□ -1.03
HMGB3P5-201ENST00000428894 TPX2Q9ULW0 747 aaKnown RBP8.63□□□□□ -1.03
HMGB3P5-201ENST00000428894 PGRP06401 933 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 ITGAEP38570 1179 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 NKPD1Q17RQ9 610 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 ZNF792Q3KQV3 632 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 PRAMEF13Q5VWM6 474 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 DIEXFQ68CQ4 756 aaKnown RBP8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 RELL1Q8IUW5 271 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 SPACA3Q8IXA5 215 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 RIN3Q8TB24 985 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 XAGE3Q8WTP9 111 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 MAPK8IP1Q9UQF2 711 aa8.62□□□□□ -1.03
HMGB3P5-201ENST00000428894 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms