RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
ATG4B-210ENST00000428861 SCYL3Q8IZE3 742 aa13.02□□□□□ -0.33
ATG4B-210ENST00000428861 TNS4Q8IZW8 715 aa13.02□□□□□ -0.33
ATG4B-210ENST00000428861 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
ATG4B-210ENST00000428861 GCC1Q96CN9 775 aa13.02□□□□□ -0.33
ATG4B-210ENST00000428861 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
ATG4B-210ENST00000428861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.33
ATG4B-210ENST00000428861 PTPRAP18433 802 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 USP5P45974 858 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 GTF2A2P52657 109 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 AAMPQ13685 434 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-210ENST00000428861 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 CFHR5Q9BXR6 569 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 PUS7LQ9H0K6 701 aaKnown RBP13.01□□□□□ -0.33
ATG4B-210ENST00000428861 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
ATG4B-210ENST00000428861 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
ATG4B-210ENST00000428861 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 BTBD19C9JJ37 291 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 SMIM22K7EJ46 135 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 GPR25O00155 361 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 CTNND1O60716 968 aaKnown RBP13□□□□□ -0.33
ATG4B-210ENST00000428861 MBD4O95243 580 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 MX1P20591 662 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 PLCD1P51178 756 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 CRHR2Q13324 411 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 UBE3CQ15386 1083 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 KBTBD3Q8NAB2 608 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 ZNF296Q8WUU4 475 aaPredicted RBP13□□□□□ -0.33
ATG4B-210ENST00000428861 GPATCH3Q96I76 525 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 LNPKQ9C0E8 428 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 AFG3L2Q9Y4W6 797 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 ZHX2Q9Y6X8 837 aa13□□□□□ -0.33
ATG4B-210ENST00000428861 CYP2D6P10635 497 aa12.99□□□□□ -0.33
ATG4B-210ENST00000428861 CAP1Q01518 475 aa12.99□□□□□ -0.33
ATG4B-210ENST00000428861 SNAPC2Q13487 334 aa12.99□□□□□ -0.33
ATG4B-210ENST00000428861 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-210ENST00000428861 DCP1AQ9NPI6 582 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-210ENST00000428861 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
ATG4B-210ENST00000428861 DDX60LQ5H9U9 1706 aaKnown RBP12.99□□□□□ -0.33
ATG4B-210ENST00000428861 GDF11O95390 407 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 ALDH1A1P00352 501 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 CETPP11597 493 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 CAP2P40123 477 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 PDE1AP54750 535 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 DGKZQ13574 1117 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 GPAT2Q6NUI2 795 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 CERS3Q8IU89 383 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-210ENST00000428861 OSBP2Q969R2 916 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATG4B-210ENST00000428861 PICK1Q9NRD5 415 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
ATG4B-210ENST00000428861 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 A0A0G2JLL6 359 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-210ENST00000428861 M0R2C6 588 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 CXCL11O14625 94 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
ATG4B-210ENST00000428861 HLA-DOAP06340 250 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 NUCB1Q02818 461 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 GABPAQ06546 454 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 PRRT2Q7Z6L0 340 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-210ENST00000428861 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
ATG4B-210ENST00000428861 CRNKL1Q9BZJ0 848 aaKnown RBP12.97□□□□□ -0.33
ATG4B-210ENST00000428861 MCOLN1Q9GZU1 580 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 MYH1P12882 1939 aa12.97□□□□□ -0.33
ATG4B-210ENST00000428861 CYP2D7A0A087X1C5 515 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 TRIM75PA6NK02 468 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 ERC2O15083 957 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.33
ATG4B-210ENST00000428861 SHMT1P34896 483 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 NOM1Q5C9Z4 860 aaKnown RBP12.96□□□□□ -0.33
ATG4B-210ENST00000428861 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 TATDN1Q6P1N9 297 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-210ENST00000428861 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.33
ATG4B-210ENST00000428861 EHD4Q9H223 541 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
ATG4B-210ENST00000428861 MYH7P12883 1935 aa12.96□□□□□ -0.34
ATG4B-210ENST00000428861 FKTNO75072 461 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-210ENST00000428861 SPP2Q13103 211 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-210ENST00000428861 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 SLC44A5Q8NCS7 719 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 APPBP2Q92624 585 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 ZBTB21Q9ULJ3 1066 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 SLC4A4Q9Y6R1 1079 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
ATG4B-210ENST00000428861 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
ATG4B-210ENST00000428861 PDHXO00330 501 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms