RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
ERCC3-202ENST00000426778 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-202ENST00000426778 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-202ENST00000426778 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 NOM1Q5C9Z4 860 aaKnown RBP16.5■□□□□ 0.23
ERCC3-202ENST00000426778 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-202ENST00000426778 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 SLC4A8Q2Y0W8 1093 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 MFSD6Q6ZSS7 791 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 REXO1L1PQ8IX06 675 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 MED15Q96RN5 788 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 ABCF2Q9UG63 623 aa16.5■□□□□ 0.23
ERCC3-202ENST00000426778 TRIM28Q13263 835 aaKnown RBP16.49■□□□□ 0.23
ERCC3-202ENST00000426778 TTF1Q15361 905 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-202ENST00000426778 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 EVX2Q03828 476 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 POSTNQ15063 836 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 EARS2Q5JPH6 523 aaKnown RBP16.49■□□□□ 0.23
ERCC3-202ENST00000426778 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 PLA2G12BQ9BX93 195 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
ERCC3-202ENST00000426778 WNT7AO00755 349 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 CUTAO60888 179 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 GNG11P61952 73 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 RTN1Q16799 776 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
ERCC3-202ENST00000426778 MNS1Q8NEH6 495 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 DHX58Q96C10 678 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 TMEM87BQ96K49 555 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 PPP2R2CQ9Y2T4 447 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
ERCC3-202ENST00000426778 VWA3AA6NCI4 1184 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 MMP1P03956 469 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 AKNAD1Q5T1N1 836 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 ADGRA1Q86SQ6 560 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 UBXN4Q92575 508 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 WTAPQ15007 396 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 TMEM139Q8IV31 216 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 CSRNP2Q9H175 543 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 ECM29Q5VYK3 1845 aa16.48■□□□□ 0.23
ERCC3-202ENST00000426778 KIF2AO00139 706 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 POLR3GO15318 223 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 TEX33O43247 280 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 FMNL1O95466 1100 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 PUM3Q15397 648 aaKnown RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 MPHOSPH8Q99549 860 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 FBXO2Q9UK22 296 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 A0A087X0B3 334 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 TERF2Q15554 542 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 BAG1Q99933 345 aaPredicted RBP16.47■□□□□ 0.23
ERCC3-202ENST00000426778 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
ERCC3-202ENST00000426778 CBFA2T2O43439 604 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 CYP19A1P11511 503 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-202ENST00000426778 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 LPIN2Q92539 896 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 PARP3Q9Y6F1 533 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 PDE8AO60658 829 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 H2AFXP16104 143 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-202ENST00000426778 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
ERCC3-202ENST00000426778 TEX35Q5T0J7 233 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 SMARCE1Q969G3 411 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 LZTFL1Q9NQ48 299 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 KCND1Q9NSA2 647 aa16.46■□□□□ 0.23
ERCC3-202ENST00000426778 SUSD4Q5VX71 490 aa16.46■□□□□ 0.22
ERCC3-202ENST00000426778 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.22
ERCC3-202ENST00000426778 TC2NQ8N9U0 490 aa16.46■□□□□ 0.22
ERCC3-202ENST00000426778 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.22
ERCC3-202ENST00000426778 FHOD1Q9Y613 1164 aa16.46■□□□□ 0.22
ERCC3-202ENST00000426778 WDR19Q8NEZ3 1342 aa16.46■□□□□ 0.22
ERCC3-202ENST00000426778 SOWAHDA6NJG2 315 aa16.45■□□□□ 0.22
ERCC3-202ENST00000426778 IFNAR1P17181 557 aa16.45■□□□□ 0.22
ERCC3-202ENST00000426778 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
ERCC3-202ENST00000426778 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
ERCC3-202ENST00000426778 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
ERCC3-202ENST00000426778 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
ERCC3-202ENST00000426778 KIF20AO95235 890 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 CRACR2BQ8N4Y2 399 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-202ENST00000426778 MRPL44Q9H9J2 332 aaKnown RBP16.44■□□□□ 0.22
ERCC3-202ENST00000426778 DDX60Q8IY21 1712 aaKnown RBP16.44■□□□□ 0.22
ERCC3-202ENST00000426778 ERICH2A1L162 156 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 PNMA6AP0CW24 399 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-202ENST00000426778 SLC5A1P13866 664 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms