RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.69■■□□□ 1.06
SBDSP1-202ENST00000423945 CTNND1O60716 968 aaKnown RBP21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 CAP1Q01518 475 aa21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 TMED8Q6PL24 325 aaPredicted RBP21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 CCDC84Q86UT8 332 aaPredicted RBP21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 HAUS7Q99871 368 aa21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 DNAJC18Q9H819 358 aa21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 PAG1Q9NWQ8 432 aa21.68■■□□□ 1.06
SBDSP1-202ENST00000423945 TAF1CQ15572 869 aaPredicted RBP21.67■■□□□ 1.06
SBDSP1-202ENST00000423945 SLFNL1Q499Z3 407 aa21.67■■□□□ 1.06
SBDSP1-202ENST00000423945 SLC9C2Q5TAH2 1124 aa21.67■■□□□ 1.06
SBDSP1-202ENST00000423945 DHX36Q9H2U1 1008 aaKnown RBP21.67■■□□□ 1.06
SBDSP1-202ENST00000423945 PALD1Q9ULE6 856 aa21.67■■□□□ 1.06
SBDSP1-202ENST00000423945 ZHX2Q9Y6X8 837 aa21.67■■□□□ 1.06
SBDSP1-202ENST00000423945 ZNF532Q9HCE3 1301 aa21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 CHGBP05060 677 aa21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 METTL16Q86W50 562 aaKnown RBP21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 PI4KBQ9UBF8 816 aa21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 SAP30BPQ9UHR5 308 aaKnown RBP21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 HERC5Q9UII4 1024 aaKnown RBP21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 AFG3L2Q9Y4W6 797 aa21.66■■□□□ 1.06
SBDSP1-202ENST00000423945 NAV1Q8NEY1 1877 aa21.65■■□□□ 1.06
SBDSP1-202ENST00000423945 CXCL11O14625 94 aa21.65■■□□□ 1.06
SBDSP1-202ENST00000423945 JAG1P78504 1218 aa21.65■■□□□ 1.06
SBDSP1-202ENST00000423945 ZCCHC17Q9NP64 241 aaKnown RBP21.65■■□□□ 1.06
SBDSP1-202ENST00000423945 HTTP42858 3142 aa21.64■■□□□ 1.06
SBDSP1-202ENST00000423945 ZSWIM8A7E2V4 1837 aa21.64■■□□□ 1.06
SBDSP1-202ENST00000423945 CAP2P40123 477 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 SLC4A8Q2Y0W8 1093 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 GPAT2Q6NUI2 795 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 ANKRD23Q86SG2 305 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 CERS3Q8IU89 383 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 ZFYVE28Q9HCC9 887 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 PICK1Q9NRD5 415 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 ECHDC1Q9NTX5 307 aa21.64■■□□□ 1.05
SBDSP1-202ENST00000423945 A0A0G2JLL6 359 aaPredicted RBP21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 MAGEB6P1A0A0J9YX57 407 aa21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 ADD2P35612 726 aa21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 SHROOM1Q2M3G4 852 aaPredicted RBP21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 PRRT2Q7Z6L0 340 aaPredicted RBP21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
SBDSP1-202ENST00000423945 ADGRA2Q96PE1 1338 aa21.62■■□□□ 1.05
SBDSP1-202ENST00000423945 CCDC85CA6NKD9 419 aa21.62■■□□□ 1.05
SBDSP1-202ENST00000423945 USP5P45974 858 aa21.62■■□□□ 1.05
SBDSP1-202ENST00000423945 FOXP4Q8IVH2 680 aaPredicted RBP21.62■■□□□ 1.05
SBDSP1-202ENST00000423945 LCORLQ8N3X6 602 aa21.62■■□□□ 1.05
SBDSP1-202ENST00000423945 PDHXO00330 501 aa21.61■■□□□ 1.05
SBDSP1-202ENST00000423945 TLR2O60603 784 aa21.61■■□□□ 1.05
SBDSP1-202ENST00000423945 SP3Q02447 781 aa21.61■■□□□ 1.05
SBDSP1-202ENST00000423945 OTUD7AQ8TE49 926 aaPredicted RBP21.61■■□□□ 1.05
SBDSP1-202ENST00000423945 LOC285556D6RIA3 1793 aa21.61■■□□□ 1.05
SBDSP1-202ENST00000423945 EVX2Q03828 476 aa21.6■■□□□ 1.05
SBDSP1-202ENST00000423945 PKN2Q16513 984 aaKnown RBP21.6■■□□□ 1.05
SBDSP1-202ENST00000423945 OTOP1Q7RTM1 612 aa21.6■■□□□ 1.05
SBDSP1-202ENST00000423945 HPS5Q9UPZ3 1129 aa21.6■■□□□ 1.05
SBDSP1-202ENST00000423945 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
SBDSP1-202ENST00000423945 HLA-DOAP06340 250 aa21.59■■□□□ 1.05
SBDSP1-202ENST00000423945 ERO1AQ96HE7 468 aa21.59■■□□□ 1.05
SBDSP1-202ENST00000423945 ARMT1Q9H993 441 aa21.59■■□□□ 1.05
SBDSP1-202ENST00000423945 BAZ2AQ9UIF9 1905 aaKnown RBP21.59■■□□□ 1.05
SBDSP1-202ENST00000423945 SALL3Q9BXA9 1300 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 GDF11O95390 407 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 PLCD1P51178 756 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 HDAC1Q13547 482 aaPredicted RBP21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 UBE3CQ15386 1083 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 FBXO46Q6PJ61 603 aaPredicted RBP21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 C17orf99Q6UX52 265 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 CRACR2BQ8N4Y2 399 aaPredicted RBP21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 SDR42E1Q8WUS8 393 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 CRNKL1Q9BZJ0 848 aaKnown RBP21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 TRIM17Q9Y577 477 aa21.58■■□□□ 1.05
SBDSP1-202ENST00000423945 PRKAB2O43741 272 aa21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 MBD4O95243 580 aa21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 SPP2Q13103 211 aa21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 GADL1Q6ZQY3 521 aa21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 EHD4Q9H223 541 aa21.57■■□□□ 1.04
SBDSP1-202ENST00000423945 USP17L5A8MUK1 530 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 CYP2C8P10632 490 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 TATDN1Q6P1N9 297 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 FASTKD5Q7L8L6 764 aaKnown RBP21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 ZNF280CQ8ND82 737 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 EXOC6Q8TAG9 804 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 ARHGAP39Q9C0H5 1083 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 DCP1AQ9NPI6 582 aaPredicted RBP21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 CPA4Q9UI42 421 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 SERPINB13Q9UIV8 391 aa21.56■■□□□ 1.04
SBDSP1-202ENST00000423945 CTGFP29279 349 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 GABPAQ06546 454 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 TREML2Q5T2D2 321 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 TTC6Q86TZ1 520 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 KBTBD3Q8NAB2 608 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 GPATCH3Q96I76 525 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 PUS7LQ9H0K6 701 aaKnown RBP21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 ZBTB21Q9ULJ3 1066 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 TTC41PQ6P2S7 1318 aa21.55■■□□□ 1.04
SBDSP1-202ENST00000423945 ASNSP08243 561 aa21.54■■□□□ 1.04
SBDSP1-202ENST00000423945 CYP2D6P10635 497 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms