RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CASP7P55210 303 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 FSIP1Q8NA03 581 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 SYT1P21579 422 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 NSMFQ6X4W1 530 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.16□□□□□ -0.62
CMSS1-201ENST00000421999 INTS4Q96HW7 963 aaKnown RBP11.16□□□□□ -0.62
CMSS1-201ENST00000421999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
CMSS1-201ENST00000421999 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 DCAF15Q66K64 600 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
CMSS1-201ENST00000421999 CYP2D7A0A087X1C5 515 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 CALML3P27482 149 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 GNA11P29992 359 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 C3orf67Q6ZVT6 689 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 RTKN2Q8IZC4 609 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-201ENST00000421999 CLIP2Q9UDT6 1046 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 ME3Q16798 604 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 CIAPIN1Q6FI81 312 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 HOMER2Q9NSB8 354 aa11.15□□□□□ -0.62
CMSS1-201ENST00000421999 ZNHIT6Q9NWK9 470 aaKnown RBP11.15□□□□□ -0.62
CMSS1-201ENST00000421999 PLSCR1O15162 318 aa11.15□□□□□ -0.63
CMSS1-201ENST00000421999 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.63
CMSS1-201ENST00000421999 MAP3K11Q16584 847 aa11.15□□□□□ -0.63
CMSS1-201ENST00000421999 SP8Q8IXZ3 490 aa11.15□□□□□ -0.63
CMSS1-201ENST00000421999 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.63
CMSS1-201ENST00000421999 PKD2L1Q9P0L9 805 aa11.15□□□□□ -0.63
CMSS1-201ENST00000421999 AOC3Q16853 763 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 CRAMP1Q96RY5 1269 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 JAK2O60674 1132 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 DNM1Q05193 864 aaKnown RBP11.14□□□□□ -0.63
CMSS1-201ENST00000421999 ERMNQ8TAM6 284 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 PHKBQ93100 1093 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 SMARCE1Q969G3 411 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
CMSS1-201ENST00000421999 ATP8A2Q9NTI2 1148 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
CMSS1-201ENST00000421999 OTUD7BQ6GQQ9 843 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 SPC24Q8NBT2 197 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 TBC1D16Q8TBP0 767 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 DEF6Q9H4E7 631 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 TPCN1Q9ULQ1 816 aa11.14□□□□□ -0.63
CMSS1-201ENST00000421999 BACH1O14867 736 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 F13A1P00488 732 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 NECTIN1Q15223 517 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 PPFIBP1Q86W92 1011 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
CMSS1-201ENST00000421999 ARID3AQ99856 593 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 ZNF277Q9NRM2 450 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-201ENST00000421999 ZBTB21Q9ULJ3 1066 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 hCG_1642624A0A1W2PR95 340 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 BIN1O00499 593 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-201ENST00000421999 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
CMSS1-201ENST00000421999 V9GY48 417 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-201ENST00000421999 BCL9LQ86UU0 1499 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 TRIM75PA6NK02 468 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 MARCKSP29966 332 aaPredicted RBP11.13□□□□□ -0.63
CMSS1-201ENST00000421999 FAM173BQ6P4H8 233 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
CMSS1-201ENST00000421999 CMTR1Q8N1G2 835 aaKnown RBP11.12□□□□□ -0.63
CMSS1-201ENST00000421999 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-201ENST00000421999 TNKSO95271 1327 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 ARID4AP29374 1257 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-201ENST00000421999 CACNB3P54284 484 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 AMPD3Q01432 767 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 CERKLQ49MI3 558 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-201ENST00000421999 CCDC70Q6NSX1 233 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 LRP10Q7Z4F1 713 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 SYCP3Q8IZU3 236 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 SYCE3A1L190 88 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 KLRK1P26718 216 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 ADD1P35611 737 aaKnown RBP11.12□□□□□ -0.63
CMSS1-201ENST00000421999 USH1GQ495M9 461 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 TCERG1LQ5VWI1 586 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 FILIP1Q7Z7B0 1213 aa11.12□□□□□ -0.63
CMSS1-201ENST00000421999 TBCAO75347 108 aaKnown RBP11.11□□□□□ -0.63
CMSS1-201ENST00000421999 KIF20AO95235 890 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
CMSS1-201ENST00000421999 ECE2O60344 883 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 CFAP100Q494V2 611 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 ISM2Q6H9L7 571 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 SLIT2O94813 1529 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 ABCC12Q96J65 1359 aa11.11□□□□□ -0.63
CMSS1-201ENST00000421999 ZBED4O75132 1171 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms