RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 ZNF654Q8IZM8 581 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 CRACR2BQ8N4Y2 399 aaPredicted RBP21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 ESR2Q92731 530 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 TOMM22Q9NS69 142 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 MYH6P13533 1939 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 LAMB1P07942 1786 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 CCDC196A0A1B0GTZ2 297 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 SMIM22K7EJ46 135 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 CDC25BP30305 580 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 GUCY1A2P33402 732 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 NOLC1Q14978 699 aaKnown RBP eCLIP21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 PPP2R5BQ15173 497 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 DHX40Q8IX18 779 aaKnown RBP21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 FANCBQ8NB91 859 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 SPC24Q8NBT2 197 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 KIAA1468Q9P260 1216 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 HPSEQ9Y251 543 aa21.94■■□□□ 1.1
CROCCP3-202ENST00000420820 MROH7-TTC4A0A0A0MT08 1334 aa21.93■■□□□ 1.1
CROCCP3-202ENST00000420820 ZNF202O95125 648 aa21.93■■□□□ 1.1
CROCCP3-202ENST00000420820 MMP1P03956 469 aa21.93■■□□□ 1.1
CROCCP3-202ENST00000420820 HIBADHP31937 336 aaKnown RBP21.93■■□□□ 1.1
CROCCP3-202ENST00000420820 TIGD1Q96MW7 591 aa21.93■■□□□ 1.1
CROCCP3-202ENST00000420820 SDF4Q9BRK5 362 aa21.93■■□□□ 1.1
CROCCP3-202ENST00000420820 PFKFB1P16118 471 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 KIAA1524Q8TCG1 905 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 UBAC1Q9BSL1 405 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 TRIM5Q9C035 493 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 TNKSO95271 1327 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 DEXIO95424 95 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 MECOMQ03112 1051 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 TRIM22Q8IYM9 498 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 JMYQ8N9B5 988 aa21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 GJD4Q96KN9 370 aaPredicted RBP21.92■■□□□ 1.1
CROCCP3-202ENST00000420820 CTR9Q6PD62 1173 aa21.91■■□□□ 1.1
CROCCP3-202ENST00000420820 NOSTRINQ8IVI9 506 aa21.91■■□□□ 1.1
CROCCP3-202ENST00000420820 BPIFA3Q9BQP9 254 aa21.91■■□□□ 1.1
CROCCP3-202ENST00000420820 R3HCC1Q9Y3T6 440 aaKnown RBP21.91■■□□□ 1.1
CROCCP3-202ENST00000420820 GOLGA6L19H0YKK7 550 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 MARCKSP29966 332 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 SHC4Q6S5L8 630 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 CEP57L1Q8IYX8 460 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 STK11IPQ8N1F8 1099 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 ENAHQ8N8S7 591 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 ZSCAN10Q96SZ4 725 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 FOXP1Q9H334 677 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 RBM6P78332 1123 aaKnown RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 GNL2Q13823 731 aaKnown RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 RESP18Q5W5W9 173 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 ERCC4Q92889 916 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 MRFAP1L1Q96HT8 127 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 PYCARDQ9ULZ3 195 aa21.9■■□□□ 1.1
CROCCP3-202ENST00000420820 A0A087WWV3 80 aa21.89■■□□□ 1.09
CROCCP3-202ENST00000420820 CYP2D7A0A087X1C5 515 aa21.89■■□□□ 1.09
CROCCP3-202ENST00000420820 PTGS1P23219 599 aa21.89■■□□□ 1.09
CROCCP3-202ENST00000420820 FAM182BQ5T319 152 aa21.89■■□□□ 1.09
CROCCP3-202ENST00000420820 CCDC24Q8N4L8 307 aa21.89■■□□□ 1.09
CROCCP3-202ENST00000420820 RNF26Q9BY78 433 aaPredicted RBP21.89■■□□□ 1.09
CROCCP3-202ENST00000420820 BTBD18B2RXH4 712 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 CUTAO60888 179 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 IGSF3O75054 1194 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 TOB1P50616 345 aaPredicted RBP21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 FUT2Q10981 343 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 TXNRD3Q86VQ6 643 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 DIS3L2Q8IYB7 885 aaKnown RBP21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 NAT10Q9H0A0 1025 aaKnown RBP21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 ORC4O43929 436 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 SLC3A2P08195 630 aaKnown RBP21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 CCDC186Q7Z3E2 898 aa21.88■■□□□ 1.09
CROCCP3-202ENST00000420820 ONECUT3O60422 494 aaPredicted RBP21.87■■□□□ 1.09
CROCCP3-202ENST00000420820 SAFBQ15424 915 aaKnown RBP eCLIP21.87■■□□□ 1.09
CROCCP3-202ENST00000420820 DCP1AQ9NPI6 582 aaPredicted RBP21.87■■□□□ 1.09
CROCCP3-202ENST00000420820 ATP8A2Q9NTI2 1148 aa21.87■■□□□ 1.09
CROCCP3-202ENST00000420820 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 USP17L21D6R901 530 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 PRDX5P30044 214 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 SYKP43405 635 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 NLRP12P59046 1061 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 SBK1Q52WX2 424 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 CMTR1Q8N1G2 835 aaKnown RBP21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 C17orf53Q8N3J3 647 aaPredicted RBP21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 NUP133Q8WUM0 1156 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 NRBP1Q9UHY1 535 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 TUBE1Q9UJT0 475 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 KCNJ14Q9UNX9 436 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 BECN2A8MW95 431 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 TROAPQ12815 778 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 DPCR1Q3MIW9 517 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 TRAPPC3LQ5T215 181 aa21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 CRNKL1Q9BZJ0 848 aaKnown RBP21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 TRPC5Q9UL62 973 aaPredicted RBP21.86■■□□□ 1.09
CROCCP3-202ENST00000420820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.85■■□□□ 1.09
CROCCP3-202ENST00000420820 RFC4P35249 363 aa21.85■■□□□ 1.09
CROCCP3-202ENST00000420820 NFIXQ14938 502 aa21.85■■□□□ 1.09
CROCCP3-202ENST00000420820 PKN1Q16512 942 aa21.85■■□□□ 1.09
CROCCP3-202ENST00000420820 RILPL1Q5EBL4 403 aa21.85■■□□□ 1.09
CROCCP3-202ENST00000420820 IQCA1Q86XH1 822 aa21.85■■□□□ 1.09
CROCCP3-202ENST00000420820 SHISA4Q96DD7 197 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms