RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
PTP4A1P1-201ENST00000420539 WASHC2CQ9Y4E1 1318 aa6.97□□□□□ -1.29
PTP4A1P1-201ENST00000420539 NFKBIEO00221 500 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 GIPC1O14908 333 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 FBXO24O75426 580 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 LDHCP07864 332 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 EPXP11678 715 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 AMPD1P23109 780 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CDC25BP30305 580 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 GSTT1P30711 240 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 GRIA4P48058 902 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SOX9P48436 509 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TCEA2Q15560 299 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 C2orf27AQ580R0 203 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CCDC174Q6PII3 467 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CCNJLQ8IV13 435 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 IFNL3Q8IZI9 196 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CXorf38Q8TB03 319 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 EDARADDQ8WWZ3 215 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 NXPE3Q969Y0 559 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 E2F7Q96AV8 911 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 POP1Q99575 1024 aaKnown RBP6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 LPIN3Q9BQK8 851 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 JPH1Q9HDC5 661 aaPredicted RBP6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 MRPS23Q9Y3D9 190 aaKnown RBP6.96□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CCDC163A0A0D9SF12 145 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 PDPK1O15530 556 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TIMM44O43615 452 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 PTMAP06454 111 aaKnown RBP6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TRAPPC10P48553 1259 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 RASSF7Q02833 373 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 GRAMD1BQ3KR37 738 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 L1TD1Q5T7N2 865 aaKnown RBP6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ACBD5Q5T8D3 534 aaPredicted RBP6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SLC4A10Q6U841 1118 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 C8orf86Q6ZUL3 223 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 THNSL2Q86YJ6 484 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CHPFQ8IZ52 775 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TMEM102Q8N9M5 508 aaPredicted RBP6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 MYRIPQ8NFW9 859 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CHAC2Q8WUX2 184 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 PTPRHQ9HD43 1115 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 RASGRP1O95267 797 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ASMTLO95671 621 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ALBP02768 609 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 RAB27AP51159 221 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 RASGRF1Q13972 1273 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 AXDND1Q5T1B0 1012 aaPredicted RBP6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 PRPF40BQ6NWY9 871 aaKnown RBP6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 LYPD4Q6UWN0 246 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 WHAMMQ8TF30 809 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CPLX3Q8WVH0 158 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 EAF1Q96JC9 268 aaPredicted RBP6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 MDFIQ99750 246 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 BHLHE41Q9C0J9 482 aaPredicted RBP6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TAGLN3Q9UI15 199 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 PLAAQ9Y263 795 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
PTP4A1P1-201ENST00000420539 A0A096LPE4 126 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 A0A1W2PPZ6 126 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 FAM177BA6PVY3 158 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SMAD7O15105 426 aaKnown RBP6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 OIP5O43482 229 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 BCRP11274 1271 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 PTPRAP18433 802 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CALRP27797 417 aaKnown RBP6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 STAT3P40763 770 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 NFKB2Q00653 900 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 MORC3Q14149 939 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 KCTD2Q14681 263 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CHSY3Q70JA7 882 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 C3orf58Q8NDZ4 430 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 THAP3Q8WTV1 239 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 AS3MTQ9HBK9 375 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ST7Q9NRC1 585 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SH2B1Q9NRF2 756 aaPredicted RBP6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 ZIM2Q9NZV7 527 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 MCM8Q9UJA3 840 aa6.93□□□□□ -1.3
PTP4A1P1-201ENST00000420539 M0R082 166 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 AKAP10O43572 662 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CELA2BP08218 269 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SLURP2P0DP57 97 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 DDR2Q16832 855 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 CCDC184Q52MB2 194 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 TPTE2Q6XPS3 522 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SPICE1Q8N0Z3 855 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 SYNPOQ8N3V7 929 aa6.92□□□□□ -1.3
PTP4A1P1-201ENST00000420539 JMYQ8N9B5 988 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms