RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 DYNLL1P63167 89 aaKnown RBP25.88■■□□□ 1.73
CPNE1-211ENST00000420363 PPIL2Q13356 520 aa25.88■■□□□ 1.73
CPNE1-211ENST00000420363 TGFBRAP1Q8WUH2 860 aa25.88■■□□□ 1.73
CPNE1-211ENST00000420363 MYH1P12882 1939 aa25.88■■□□□ 1.73
CPNE1-211ENST00000420363 ZNF532Q9HCE3 1301 aa25.88■■□□□ 1.73
CPNE1-211ENST00000420363 PPATQ06203 517 aa25.87■■□□□ 1.73
CPNE1-211ENST00000420363 CD99L2Q8TCZ2 262 aa25.87■■□□□ 1.73
CPNE1-211ENST00000420363 OTUD5Q96G74 571 aa25.87■■□□□ 1.73
CPNE1-211ENST00000420363 MS4A4AQ96JQ5 239 aa25.87■■□□□ 1.73
CPNE1-211ENST00000420363 RWDD1Q9H446 243 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-211ENST00000420363 ZBTB47Q9UFB7 747 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-211ENST00000420363 HERC5Q9UII4 1024 aaKnown RBP25.87■■□□□ 1.73
CPNE1-211ENST00000420363 SALL3Q9BXA9 1300 aa25.87■■□□□ 1.73
CPNE1-211ENST00000420363 ERC2O15083 957 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 ADD2P35612 726 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 GTF2A2P52657 109 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 SP3Q02447 781 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 MAPKAPK5Q8IW41 473 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 CNKSR2Q8WXI2 1034 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 EFCC1Q9HA90 598 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 PI4KBQ9UBF8 816 aa25.86■■□□□ 1.73
CPNE1-211ENST00000420363 MAGEB6P1A0A0J9YX57 407 aa25.85■■□□□ 1.73
CPNE1-211ENST00000420363 PRPF38BQ5VTL8 546 aaKnown RBP25.85■■□□□ 1.73
CPNE1-211ENST00000420363 SMC5Q8IY18 1101 aa25.85■■□□□ 1.73
CPNE1-211ENST00000420363 ATAD5Q96QE3 1844 aa25.85■■□□□ 1.73
CPNE1-211ENST00000420363 CCL15-CCL14A0A0B4J2E2 113 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 CTNND1O60716 968 aaKnown RBP25.84■■□□□ 1.73
CPNE1-211ENST00000420363 GLRX3O76003 335 aaKnown RBP25.84■■□□□ 1.73
CPNE1-211ENST00000420363 MX1P20591 662 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 UBE3CQ15386 1083 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 CCL15Q16663 113 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 ZSCAN25Q6NSZ9 544 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 METTL16Q86W50 562 aaKnown RBP25.84■■□□□ 1.73
CPNE1-211ENST00000420363 SCYL3Q8IZE3 742 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 BRI3BPQ8WY22 251 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 PTPN22Q9Y2R2 807 aa25.84■■□□□ 1.73
CPNE1-211ENST00000420363 ANKRD45Q5TZF3 282 aa25.83■■□□□ 1.73
CPNE1-211ENST00000420363 KBTBD3Q8NAB2 608 aa25.83■■□□□ 1.73
CPNE1-211ENST00000420363 PI4K2BQ8TCG2 481 aa25.83■■□□□ 1.73
CPNE1-211ENST00000420363 ZFYVE28Q9HCC9 887 aa25.83■■□□□ 1.73
CPNE1-211ENST00000420363 PHIPQ8WWQ0 1821 aa25.83■■□□□ 1.73
CPNE1-211ENST00000420363 HLA-DOAP06340 250 aa25.82■■□□□ 1.72
CPNE1-211ENST00000420363 USP5P45974 858 aa25.82■■□□□ 1.72
CPNE1-211ENST00000420363 SNAPC2Q13487 334 aa25.82■■□□□ 1.72
CPNE1-211ENST00000420363 TAF1CQ15572 869 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-211ENST00000420363 TSHZ3Q63HK5 1081 aa25.82■■□□□ 1.72
CPNE1-211ENST00000420363 CRNKL1Q9BZJ0 848 aaKnown RBP25.82■■□□□ 1.72
CPNE1-211ENST00000420363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.82■■□□□ 1.729e-8■■■■■ 116.8
CPNE1-211ENST00000420363 KCNH4Q9UQ05 1017 aa25.82■■□□□ 1.72
CPNE1-211ENST00000420363 IRF6O14896 467 aa25.81■■□□□ 1.72
CPNE1-211ENST00000420363 ARHGEF6Q15052 776 aa25.81■■□□□ 1.72
CPNE1-211ENST00000420363 OTUD7AQ8TE49 926 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-211ENST00000420363 PICK1Q9NRD5 415 aa25.81■■□□□ 1.72
CPNE1-211ENST00000420363 PTPRFP10586 1907 aa25.8■■□□□ 1.72
CPNE1-211ENST00000420363 CETPP11597 493 aa25.8■■□□□ 1.72
CPNE1-211ENST00000420363 FOXP4Q8IVH2 680 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-211ENST00000420363 ZCCHC17Q9NP64 241 aaKnown RBP25.8■■□□□ 1.72
CPNE1-211ENST00000420363 LCORLQ8N3X6 602 aa25.79■■□□□ 1.72
CPNE1-211ENST00000420363 EHD4Q9H223 541 aa25.79■■□□□ 1.72
CPNE1-211ENST00000420363 STAP2Q9UGK3 403 aa25.79■■□□□ 1.72
CPNE1-211ENST00000420363 PALD1Q9ULE6 856 aa25.79■■□□□ 1.72
CPNE1-211ENST00000420363 ZFYP08048 801 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-211ENST00000420363 SLURP2P0DP57 97 aa25.78■■□□□ 1.72
CPNE1-211ENST00000420363 PTPRAP18433 802 aa25.78■■□□□ 1.72
CPNE1-211ENST00000420363 LRRFIP1Q32MZ4 808 aaKnown RBP25.78■■□□□ 1.72
CPNE1-211ENST00000420363 FAM43AQ8N2R8 423 aa25.78■■□□□ 1.72
CPNE1-211ENST00000420363 DNAJC18Q9H819 358 aa25.78■■□□□ 1.72
CPNE1-211ENST00000420363 FAM196BA6NMK8 535 aa25.77■■□□□ 1.72
CPNE1-211ENST00000420363 CXCL11O14625 94 aa25.77■■□□□ 1.72
CPNE1-211ENST00000420363 MBD4O95243 580 aa25.77■■□□□ 1.72
CPNE1-211ENST00000420363 CRACR2BQ8N4Y2 399 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-211ENST00000420363 TBC1D2Q9BYX2 928 aa25.77■■□□□ 1.72
CPNE1-211ENST00000420363 SAP30BPQ9UHR5 308 aaKnown RBP25.77■■□□□ 1.72
CPNE1-211ENST00000420363 POTEFA5A3E0 1075 aa25.76■■□□□ 1.71
CPNE1-211ENST00000420363 IGHDP01880 384 aa25.76■■□□□ 1.71
CPNE1-211ENST00000420363 CAP2P40123 477 aa25.76■■□□□ 1.71
CPNE1-211ENST00000420363 TTC6Q86TZ1 520 aa25.76■■□□□ 1.71
CPNE1-211ENST00000420363 TRIM34Q9BYJ4 488 aa25.76■■□□□ 1.71
CPNE1-211ENST00000420363 GINM1Q9NU53 330 aa25.76■■□□□ 1.71
CPNE1-211ENST00000420363 PDE1AP54750 535 aa25.75■■□□□ 1.71
CPNE1-211ENST00000420363 ARMC5Q96C12 935 aa25.75■■□□□ 1.71
CPNE1-211ENST00000420363 ARMT1Q9H993 441 aa25.75■■□□□ 1.71
CPNE1-211ENST00000420363 DCP1AQ9NPI6 582 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-211ENST00000420363 ATP8A2Q9NTI2 1148 aa25.75■■□□□ 1.71
CPNE1-211ENST00000420363 SERPINB13Q9UIV8 391 aa25.75■■□□□ 1.71
CPNE1-211ENST00000420363 TAOK2Q9UL54 1235 aa25.75■■□□□ 1.71
CPNE1-211ENST00000420363 CAP1Q01518 475 aa25.74■■□□□ 1.71
CPNE1-211ENST00000420363 NUCB1Q02818 461 aa25.74■■□□□ 1.71
CPNE1-211ENST00000420363 APPBP2Q92624 585 aa25.74■■□□□ 1.71
CPNE1-211ENST00000420363 AFG3L2Q9Y4W6 797 aa25.74■■□□□ 1.71
CPNE1-211ENST00000420363 ZHX2Q9Y6X8 837 aa25.74■■□□□ 1.71
CPNE1-211ENST00000420363 HTTP42858 3142 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 BTBD19C9JJ37 291 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 RNF113AO15541 343 aaKnown RBP25.73■■□□□ 1.71
CPNE1-211ENST00000420363 CHGBP05060 677 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 SLFNL1Q499Z3 407 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 NBPF11Q86T75 865 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 CHD1LQ86WJ1 897 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 SDR42E1Q8WUS8 393 aa25.73■■□□□ 1.71
CPNE1-211ENST00000420363 LNPKQ9C0E8 428 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms