RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 FYB2Q5VWT5 728 aa20.58■□□□□ 0.89
SHANK3-202ENST00000414786 DPP8Q6V1X1 898 aaPredicted RBP20.58■□□□□ 0.89
SHANK3-202ENST00000414786 KCNG4Q8TDN1 519 aa20.58■□□□□ 0.89
SHANK3-202ENST00000414786 SPTLC2O15270 562 aa20.58■□□□□ 0.88
SHANK3-202ENST00000414786 GNA11P29992 359 aa20.58■□□□□ 0.88
SHANK3-202ENST00000414786 TCP10L2B9ZVM9 353 aa20.58■□□□□ 0.88
SHANK3-202ENST00000414786 WASLO00401 505 aaPredicted RBP20.58■□□□□ 0.88
SHANK3-202ENST00000414786 BTG4Q9NY30 223 aa20.58■□□□□ 0.88
SHANK3-202ENST00000414786 PRKAG2Q9UGJ0 569 aa20.58■□□□□ 0.88
SHANK3-202ENST00000414786 KRT81Q14533 505 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 MLXIPQ9HAP2 919 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 MCUQ8NE86 351 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 NUCKS1Q9H1E3 243 aaKnown RBP20.57■□□□□ 0.88
SHANK3-202ENST00000414786 RTL9Q8NET4 1388 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 ACEP12821 1306 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 CTAGE3PQ8IX95 158 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 TPH2Q8IWU9 490 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 ZSCAN16Q9H4T2 348 aaPredicted RBP20.57■□□□□ 0.88
SHANK3-202ENST00000414786 NEMFO60524 1076 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 A0A1B0GVL5 298 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
SHANK3-202ENST00000414786 BRD3Q15059 726 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 CDC26Q8NHZ8 85 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 MICAL1Q8TDZ2 1067 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 POLIQ9UNA4 740 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 CETN3O15182 167 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 CDAN1Q8IWY9 1227 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 AFAP1L2Q8N4X5 818 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 SUGCTQ9HAC7 445 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 PRDM5Q9NQX1 630 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-202ENST00000414786 ZFYP08048 801 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-202ENST00000414786 XPAP23025 273 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-202ENST00000414786 MRPL44Q9H9J2 332 aaKnown RBP20.56■□□□□ 0.88
SHANK3-202ENST00000414786 ERCC6LQ2NKX8 1250 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 MX2P20592 715 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 NME8Q8N427 588 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 MYL10Q9BUA6 226 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 VPS37BQ9H9H4 285 aa20.56■□□□□ 0.88
SHANK3-202ENST00000414786 CPA1P15085 419 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 VPS41P49754 854 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 PPFIBP2Q8ND30 876 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 CXorf38Q8TB03 319 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 GRM8O00222 908 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 PDIA4P13667 645 aaKnown RBP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 ADAT2Q7Z6V5 191 aaKnown RBP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 PALM3A6NDB9 673 aaPredicted RBP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 PLCG2P16885 1265 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 INPP1P49441 399 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 CTTNBP2NLQ9P2B4 639 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 STK38LQ9Y2H1 464 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 FIS1Q9Y3D6 152 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 RPL13P26373 211 aaKnown RBP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 ATP11AP98196 1134 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 CTDSPL2Q05D32 466 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 MCUR1Q96AQ8 359 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 UTP11Q9Y3A2 253 aaKnown RBP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 TTC22Q5TAA0 569 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 ANKRD42Q8N9B4 389 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 LACTBP83111 547 aaPredicted RBP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 C10orf67Q8IYJ2 551 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 STAMQ92783 540 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
SHANK3-202ENST00000414786 SUFUQ9UMX1 484 aa20.55■□□□□ 0.88
SHANK3-202ENST00000414786 HHATQ5VTY9 493 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 KAZNQ674X7 775 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 UBN1Q9NPG3 1134 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 MYSM1Q5VVJ2 828 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 ZNF594Q96JF6 807 aaPredicted RBP20.54■□□□□ 0.88
SHANK3-202ENST00000414786 FRMPD2Q68DX3 1309 aaPredicted RBP20.54■□□□□ 0.88
SHANK3-202ENST00000414786 NR1I2O75469 434 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 SDSP20132 328 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 TRIM56Q9BRZ2 755 aaKnown RBP20.54■□□□□ 0.88
SHANK3-202ENST00000414786 SH2D4AQ9H788 454 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 MAPKAPK5Q8IW41 473 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 ARHGEF16Q5VV41 709 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 NOX5Q96PH1 765 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 MTRQ99707 1265 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 UBN2Q6ZU65 1347 aa20.54■□□□□ 0.88
SHANK3-202ENST00000414786 KRT15P19012 456 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 SLC9A5Q14940 896 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 LUC7L2Q9Y383 392 aaKnown RBP20.53■□□□□ 0.88
SHANK3-202ENST00000414786 CALUO43852 315 aaPredicted RBP20.53■□□□□ 0.88
SHANK3-202ENST00000414786 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 WDR48Q8TAF3 677 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 CSADQ9Y600 493 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 PTPRCP08575 1304 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 CAMSAP2Q08AD1 1489 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 LMTK3Q96Q04 1460 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 CFTRP13569 1480 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 TNNC1P63316 161 aa20.53■□□□□ 0.88
SHANK3-202ENST00000414786 TGFBRAP1Q8WUH2 860 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms