RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 BTBD19C9JJ37 291 aa19.04■□□□□ 0.64
MCF2L-211ENST00000413354 PTPRAP18433 802 aa19.04■□□□□ 0.64
MCF2L-211ENST00000413354 ANKRD23Q86SG2 305 aa19.04■□□□□ 0.64
MCF2L-211ENST00000413354 MIGA1Q8NAN2 632 aa19.04■□□□□ 0.64
MCF2L-211ENST00000413354 PAG1Q9NWQ8 432 aa19.04■□□□□ 0.64
MCF2L-211ENST00000413354 CCDC85CA6NKD9 419 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 PDE6AP16499 860 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 USP5P45974 858 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
MCF2L-211ENST00000413354 SP3Q02447 781 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 SLC9C2Q5TAH2 1124 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 HAUS7Q99871 368 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 TBC1D2Q9BYX2 928 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.03■□□□□ 0.64
MCF2L-211ENST00000413354 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 ZHX2Q9Y6X8 837 aa19.03■□□□□ 0.64
MCF2L-211ENST00000413354 SMARCA5O60264 1052 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-211ENST00000413354 ARHGEF6Q15052 776 aa19.02■□□□□ 0.64
MCF2L-211ENST00000413354 FASTKD5Q7L8L6 764 aaKnown RBP19.02■□□□□ 0.64
MCF2L-211ENST00000413354 FOXP4Q8IVH2 680 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-211ENST00000413354 CRACR2BQ8N4Y2 399 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-211ENST00000413354 DDX60LQ5H9U9 1706 aaKnown RBP19.02■□□□□ 0.63
MCF2L-211ENST00000413354 MAGEB6P1A0A0J9YX57 407 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 FAM196BA6NMK8 535 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 TLR2O60603 784 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 CAP2P40123 477 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 FBXO46Q6PJ61 603 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-211ENST00000413354 CRBNQ96SW2 442 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 ECHDC1Q9NTX5 307 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 AFG3L2Q9Y4W6 797 aa19.01■□□□□ 0.63
MCF2L-211ENST00000413354 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 A0A0G2JLL6 359 aaPredicted RBP19■□□□□ 0.63
MCF2L-211ENST00000413354 SLURP2P0DP57 97 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 AAMPQ13685 434 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 PRRT2Q7Z6L0 340 aaPredicted RBP19■□□□□ 0.63
MCF2L-211ENST00000413354 METTL16Q86W50 562 aaKnown RBP19■□□□□ 0.63
MCF2L-211ENST00000413354 PARK7Q99497 189 aaKnown RBP19■□□□□ 0.63
MCF2L-211ENST00000413354 CRNKL1Q9BZJ0 848 aaKnown RBP19■□□□□ 0.63
MCF2L-211ENST00000413354 GINM1Q9NU53 330 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 SAP30BPQ9UHR5 308 aaKnown RBP19■□□□□ 0.63
MCF2L-211ENST00000413354 PALD1Q9ULE6 856 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 LOC285556D6RIA3 1793 aa19■□□□□ 0.63
MCF2L-211ENST00000413354 PDHXO00330 501 aa18.99■□□□□ 0.63
MCF2L-211ENST00000413354 ZSCAN25Q6NSZ9 544 aa18.99■□□□□ 0.63
MCF2L-211ENST00000413354 CD99L2Q8TCZ2 262 aa18.99■□□□□ 0.63
MCF2L-211ENST00000413354 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
MCF2L-211ENST00000413354 TRIM17Q9Y577 477 aa18.99■□□□□ 0.63
MCF2L-211ENST00000413354 TCRBV5S4A2TA0A5A2 114 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 ASNSP08243 561 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 ADD2P35612 726 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 MOGSQ13724 837 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 KIF22Q14807 665 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 GADL1Q6ZQY3 521 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 OTOP1Q7RTM1 612 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 TTC6Q86TZ1 520 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 EDC3Q96F86 508 aaKnown RBP18.98■□□□□ 0.63
MCF2L-211ENST00000413354 EHD4Q9H223 541 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 AS3MTQ9HBK9 375 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 HPS5Q9UPZ3 1129 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 SLC45A1Q9Y2W3 748 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 MYH8P13535 1937 aa18.98■□□□□ 0.63
MCF2L-211ENST00000413354 TRIM75PA6NK02 468 aa18.97■□□□□ 0.63
MCF2L-211ENST00000413354 USP17L5A8MUK1 530 aa18.97■□□□□ 0.63
MCF2L-211ENST00000413354 ZNF280CQ8ND82 737 aa18.97■□□□□ 0.63
MCF2L-211ENST00000413354 ZBTB47Q9UFB7 747 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-211ENST00000413354 UBE3CQ15386 1083 aa18.96■□□□□ 0.63
MCF2L-211ENST00000413354 PROCA1Q8NCQ7 364 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-211ENST00000413354 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
MCF2L-211ENST00000413354 SERPINB13Q9UIV8 391 aa18.96■□□□□ 0.63
MCF2L-211ENST00000413354 BAZ2AQ9UIF9 1905 aaKnown RBP18.96■□□□□ 0.63
MCF2L-211ENST00000413354 GPAT2Q6NUI2 795 aa18.95■□□□□ 0.62
MCF2L-211ENST00000413354 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-211ENST00000413354 TTC41PQ6P2S7 1318 aa18.95■□□□□ 0.62
MCF2L-211ENST00000413354 ADGRA2Q96PE1 1338 aa18.95■□□□□ 0.62
MCF2L-211ENST00000413354 ERC2O15083 957 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 POLR3DP05423 398 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-211ENST00000413354 SPP2Q13103 211 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 RRP1BQ14684 758 aaKnown RBP18.94■□□□□ 0.62
MCF2L-211ENST00000413354 SLC4A8Q2Y0W8 1093 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 C17orf99Q6UX52 265 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 CCDC84Q86UT8 332 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-211ENST00000413354 LCORLQ8N3X6 602 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 WDR18Q9BV38 432 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 PNMA3Q9UL41 463 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 AGTPBP1Q9UPW5 1226 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 MGAMO43451 1857 aa18.94■□□□□ 0.62
MCF2L-211ENST00000413354 MBD4O95243 580 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 GNRH1P01148 92 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 LACTBP83111 547 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-211ENST00000413354 PABPC4Q13310 644 aaKnown RBP eCLIP18.93■□□□□ 0.62
MCF2L-211ENST00000413354 HDAC1Q13547 482 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-211ENST00000413354 LRRFIP1Q32MZ4 808 aaKnown RBP18.93■□□□□ 0.62
MCF2L-211ENST00000413354 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 DDRGK1Q96HY6 314 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 MCM9Q9NXL9 1143 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 TAOK2Q9UL54 1235 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 PTPN22Q9Y2R2 807 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms