RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 CYP7A1P22680 504 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 MAP3K12Q12852 859 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 CRHR2Q13324 411 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 SNAPC2Q13487 334 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 PARP14Q460N5 1801 aa11.18□□□□□ -0.62
BRCC3-207ENST00000411985 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 FLT1P17948 1338 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 BRCA2P51587 3418 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 CTNND1O60716 968 aaKnown RBP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 SLURP2P0DP57 97 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 TAF1CQ15572 869 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 DNAJC2Q99543 621 aaKnown RBP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 DHX36Q9H2U1 1008 aaKnown RBP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 ZCCHC17Q9NP64 241 aaKnown RBP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 PICK1Q9NRD5 415 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 KCNH4Q9UQ05 1017 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
BRCC3-207ENST00000411985 TNRC18O15417 2968 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-207ENST00000411985 FAM196BA6NMK8 535 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 GOLIM4O00461 696 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-207ENST00000411985 PTPRAP18433 802 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 DYNLL1P63167 89 aaKnown RBP11.16□□□□□ -0.62
BRCC3-207ENST00000411985 PKN2Q16513 984 aaKnown RBP11.16□□□□□ -0.62
BRCC3-207ENST00000411985 MAPKAPK5Q8IW41 473 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 MIGA1Q8NAN2 632 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 DCTPP1Q9H773 170 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 ZFYVE28Q9HCC9 887 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 PI4KBQ9UBF8 816 aa11.16□□□□□ -0.62
BRCC3-207ENST00000411985 HERC5Q9UII4 1024 aaKnown RBP11.16□□□□□ -0.62
BRCC3-207ENST00000411985 CCDC85CA6NKD9 419 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 BTBD19C9JJ37 291 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 ATP5JP18859 108 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 SLC9C2Q5TAH2 1124 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 BOLA2Q9H3K6 86 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.62
BRCC3-207ENST00000411985 GREB1LQ9C091 1923 aaPredicted RBP11.14□□□□□ -0.63
BRCC3-207ENST00000411985 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 CXCL11O14625 94 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 PDE6AP16499 860 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 USP5P45974 858 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 SP3Q02447 781 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 ANKRD23Q86SG2 305 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 EDC3Q96F86 508 aaKnown RBP11.14□□□□□ -0.63
BRCC3-207ENST00000411985 CRBNQ96SW2 442 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 HAUS7Q99871 368 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
BRCC3-207ENST00000411985 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 AFG3L2Q9Y4W6 797 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 PCDHB15Q9Y5E8 787 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 ZHX2Q9Y6X8 837 aa11.14□□□□□ -0.63
BRCC3-207ENST00000411985 COL11A1P12107 1806 aaPredicted RBP11.14□□□□□ -0.63
BRCC3-207ENST00000411985 ZNF532Q9HCE3 1301 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 A0A0G2JLL6 359 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 TCRBV5S4A2TA0A5A2 114 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 PDHXO00330 501 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 TLR2O60603 784 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 CAP2P40123 477 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 MOGSQ13724 837 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 FBXO46Q6PJ61 603 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 PRRT2Q7Z6L0 340 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 METTL16Q86W50 562 aaKnown RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 CD99L2Q8TCZ2 262 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 GPATCH3Q96I76 525 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 ECHDC1Q9NTX5 307 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 SAP30BPQ9UHR5 308 aaKnown RBP11.13□□□□□ -0.63
BRCC3-207ENST00000411985 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 PLXNB2O15031 1838 aa11.13□□□□□ -0.63
BRCC3-207ENST00000411985 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
BRCC3-207ENST00000411985 ADD2P35612 726 aa11.12□□□□□ -0.63
BRCC3-207ENST00000411985 SLC4A8Q2Y0W8 1093 aa11.12□□□□□ -0.63
BRCC3-207ENST00000411985 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
BRCC3-207ENST00000411985 OTOP1Q7RTM1 612 aa11.12□□□□□ -0.63
BRCC3-207ENST00000411985 FOXP4Q8IVH2 680 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-207ENST00000411985 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
BRCC3-207ENST00000411985 RRP1BQ14684 758 aaKnown RBP11.11□□□□□ -0.63
BRCC3-207ENST00000411985 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
BRCC3-207ENST00000411985 GADL1Q6ZQY3 521 aa11.11□□□□□ -0.63
BRCC3-207ENST00000411985 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-207ENST00000411985 LCORLQ8N3X6 602 aa11.11□□□□□ -0.63
BRCC3-207ENST00000411985 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
BRCC3-207ENST00000411985 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
BRCC3-207ENST00000411985 EHD4Q9H223 541 aa11.11□□□□□ -0.63
BRCC3-207ENST00000411985 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
BRCC3-207ENST00000411985 RLFQ13129 1914 aa11.11□□□□□ -0.63
BRCC3-207ENST00000411985 ADGRA2Q96PE1 1338 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms