RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 USP5P45974 858 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 GIMAP6Q6P9H5 292 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 ANKRD13AQ8IZ07 590 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 DSCC1Q9BVC3 393 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 ANO2Q9NQ90 1003 aa19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 BAZ2AQ9UIF9 1905 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-208ENST00000409531 EPB41L2O43491 1005 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-208ENST00000409531 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-208ENST00000409531 WDHD1O75717 1129 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-208ENST00000409531 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-208ENST00000409531 REM2Q8IYK8 340 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-208ENST00000409531 MAP3K9P80192 1104 aa19.71■□□□□ 0.75
TSPAN4-208ENST00000409531 ZFPM1Q8IX07 1006 aa19.71■□□□□ 0.75
TSPAN4-208ENST00000409531 TGFBRAP1Q8WUH2 860 aa19.71■□□□□ 0.75
TSPAN4-208ENST00000409531 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
TSPAN4-208ENST00000409531 GSG1L2A8MUP6 293 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 SLC34A2O95436 690 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 DCAF15Q66K64 600 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 SDR42E1Q8WUS8 393 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 CLMNQ96JQ2 1002 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 CSRNP1Q96S65 589 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 ZMYM6O95789 1325 aa19.7■□□□□ 0.74
TSPAN4-208ENST00000409531 PRKAB2O43741 272 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 TDO2P48775 406 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 CTCFP49711 727 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 ALX1Q15699 326 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 VPS53Q5VIR6 699 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 MIGA2Q7L4E1 593 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 AMOTL1Q8IY63 956 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.69■□□□□ 0.741e-7■■■□□ 19.2
TSPAN4-208ENST00000409531 BACH2Q9BYV9 841 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 LSG1Q9H089 658 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 NAPBQ9H115 298 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 DCP1AQ9NPI6 582 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 DDX4Q9NQI0 724 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 CTNNA3Q9UI47 895 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 FLT1P17948 1338 aa19.69■□□□□ 0.74
TSPAN4-208ENST00000409531 CA12O43570 354 aa19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 PICALMQ13492 652 aa19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 MAPKAPK5Q8IW41 473 aa19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 ZSCAN29Q8IWY8 852 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 IFNL3Q8IZI9 196 aa19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 MAP4K1Q92918 833 aa19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 UPF2Q9HAU5 1272 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 U3KPZ7 1027 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 THSD7BQ9C0I4 1608 aa19.68■□□□□ 0.74
TSPAN4-208ENST00000409531 DDX60LQ5H9U9 1706 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 LAMB1P07942 1786 aa19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 PTH1RQ03431 593 aa19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 SH3BP5LQ7L8J4 393 aa19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 ZNF341Q9BYN7 854 aa19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 OSBPL5Q9H0X9 879 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 ARPP21Q9UBL0 812 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 CSADQ9Y600 493 aa19.67■□□□□ 0.74
TSPAN4-208ENST00000409531 LAMA4Q16363 1823 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 FOXP2O15409 715 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 FGAP02671 866 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 ZBTB48P10074 688 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 TM4SF4P48230 202 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 MKRN3Q13064 507 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 WNK4Q96J92 1243 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 WRNIP1Q96S55 665 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 DHX36Q9H2U1 1008 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 EPB41L4AQ9HCS5 686 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 MCM9Q9NXL9 1143 aa19.66■□□□□ 0.74
TSPAN4-208ENST00000409531 DDTLA6NHG4 134 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-208ENST00000409531 LBX1P52954 281 aa19.65■□□□□ 0.74
TSPAN4-208ENST00000409531 MAP3K10Q02779 954 aa19.65■□□□□ 0.74
TSPAN4-208ENST00000409531 VGLL4Q14135 290 aa19.65■□□□□ 0.74
TSPAN4-208ENST00000409531 ELP3Q9H9T3 547 aa19.65■□□□□ 0.74
TSPAN4-208ENST00000409531 ZNF112Q9UJU3 913 aa19.65■□□□□ 0.74
TSPAN4-208ENST00000409531 POLR3DP05423 398 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 MCCP23508 829 aa19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 INHBEP58166 350 aa19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 IMMTQ16891 758 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 SBK1Q52WX2 424 aa19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 RNF20Q5VTR2 975 aa19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 TTC6Q86TZ1 520 aa19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 RBM8AQ9Y5S9 174 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-208ENST00000409531 MANSC4A6NHS7 340 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 USP17L12C9JPN9 530 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 USP17L21D6R901 530 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 SEC24BO95487 1268 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 HLA-DOAP06340 250 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 HSPA8P11142 646 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 SREBF2Q12772 1141 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 ATRNL1Q5VV63 1379 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 CTR9Q6PD62 1173 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 ZKSCAN4Q969J2 545 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 RNF186Q9NXI6 227 aa19.63■□□□□ 0.73
TSPAN4-208ENST00000409531 ZNF213O14771 459 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 TBC1D12O60347 775 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 INPP5BP32019 993 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 GJA5P36382 358 aa19.62■□□□□ 0.73
TSPAN4-208ENST00000409531 OPTNQ96CV9 577 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms