RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CNTNAP4Q9C0A0 1308 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 SMTNL1A8MU46 457 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 BTBD18B2RXH4 712 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 RGL2O15211 777 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 MTERF4Q7Z6M4 381 aaKnown RBP19.42■□□□□ 0.7
NUP50-203ENST00000407019 FANCBQ8NB91 859 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 NUP133Q8WUM0 1156 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 CLIC6Q96NY7 704 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 FOXP1Q9H334 677 aaPredicted RBP19.42■□□□□ 0.7
NUP50-203ENST00000407019 SCN7AQ01118 1682 aa19.42■□□□□ 0.7
NUP50-203ENST00000407019 LTBP4Q8N2S1 1624 aa19.41■□□□□ 0.7
NUP50-203ENST00000407019 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
NUP50-203ENST00000407019 TNKSO95271 1327 aa19.41■□□□□ 0.7
NUP50-203ENST00000407019 GTF2E1P29083 439 aaPredicted RBP19.41■□□□□ 0.7
NUP50-203ENST00000407019 BICDL1Q6ZP65 573 aa19.41■□□□□ 0.7
NUP50-203ENST00000407019 FILIP1Q7Z7B0 1213 aa19.41■□□□□ 0.7
NUP50-203ENST00000407019 KRI1Q8N9T8 703 aaKnown RBP19.41■□□□□ 0.7
NUP50-203ENST00000407019 KCNJ14Q9UNX9 436 aa19.41■□□□□ 0.7
NUP50-203ENST00000407019 WTIPA6NIX2 430 aaPredicted RBP19.4■□□□□ 0.7
NUP50-203ENST00000407019 ARID5BQ14865 1188 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 SEC23AQ15436 765 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 SLC10A5Q5PT55 438 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 GSDMDP57764 484 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 PPP2R5BQ15173 497 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 CCDC82Q8N4S0 544 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 CELF1Q92879 486 aaKnown RBP19.4■□□□□ 0.7
NUP50-203ENST00000407019 FAM84BQ96KN1 310 aaPredicted RBP19.4■□□□□ 0.7
NUP50-203ENST00000407019 BRIP1Q9BX63 1249 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 CASZ1Q86V15 1759 aa19.4■□□□□ 0.7
NUP50-203ENST00000407019 DUOX1Q9NRD9 1551 aa19.39■□□□□ 0.7
NUP50-203ENST00000407019 IKBKBO14920 756 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 DYNLL1P63167 89 aaKnown RBP19.39■□□□□ 0.69
NUP50-203ENST00000407019 NCAPHQ15003 741 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 FAM98CQ17RN3 349 aaKnown RBP19.39■□□□□ 0.69
NUP50-203ENST00000407019 RILPL1Q5EBL4 403 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 C16orf45Q96MC5 204 aaPredicted RBP19.39■□□□□ 0.69
NUP50-203ENST00000407019 IMPACTQ9P2X3 320 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 RIOK3O14730 519 aaKnown RBP19.39■□□□□ 0.69
NUP50-203ENST00000407019 SEMA3EO15041 775 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 SMC2O95347 1197 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 TOB1P50616 345 aaPredicted RBP19.39■□□□□ 0.69
NUP50-203ENST00000407019 CMTR1Q8N1G2 835 aaKnown RBP19.39■□□□□ 0.69
NUP50-203ENST00000407019 KCNH3Q9ULD8 1083 aa19.39■□□□□ 0.69
NUP50-203ENST00000407019 SKILP12757 684 aa19.38■□□□□ 0.69
NUP50-203ENST00000407019 KCNQ4P56696 695 aa19.38■□□□□ 0.69
NUP50-203ENST00000407019 PNOCQ13519 176 aa19.38■□□□□ 0.69
NUP50-203ENST00000407019 TPD52L1Q16890 204 aaPredicted RBP19.38■□□□□ 0.69
NUP50-203ENST00000407019 KRBA2Q6ZNG9 492 aa19.38■□□□□ 0.69
NUP50-203ENST00000407019 RNF26Q9BY78 433 aaPredicted RBP19.38■□□□□ 0.69
NUP50-203ENST00000407019 XPO4Q9C0E2 1151 aaKnown RBP19.38■□□□□ 0.69
NUP50-203ENST00000407019 NYXQ9GZU5 481 aa19.38■□□□□ 0.69
NUP50-203ENST00000407019 OSBPL5Q9H0X9 879 aaPredicted RBP19.38■□□□□ 0.69
NUP50-203ENST00000407019 IFNKQ9P0W0 207 aa19.38■□□□□ 0.69
NUP50-203ENST00000407019 TAF1P21675 1872 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 PCP11498 1178 aaKnown RBP19.37■□□□□ 0.69
NUP50-203ENST00000407019 TNNT1P13805 278 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 CCZ1BP86790 482 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 CCZ1P86791 482 aaPredicted RBP19.37■□□□□ 0.69
NUP50-203ENST00000407019 FBXO33Q7Z6M2 555 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 CNNM3Q8NE01 707 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 ZSCAN10Q96SZ4 725 aaPredicted RBP19.37■□□□□ 0.69
NUP50-203ENST00000407019 BCL2L12Q9HB09 334 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 AKAP17AQ02040 695 aaKnown RBP19.37■□□□□ 0.69
NUP50-203ENST00000407019 ISM2Q6H9L7 571 aa19.37■□□□□ 0.69
NUP50-203ENST00000407019 METTL16Q86W50 562 aaKnown RBP19.37■□□□□ 0.69
NUP50-203ENST00000407019 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
NUP50-203ENST00000407019 SMIM22K7EJ46 135 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 PTPREP23469 700 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 LONRF3Q496Y0 759 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 ELOA2Q8IYF1 753 aaPredicted RBP19.36■□□□□ 0.69
NUP50-203ENST00000407019 NARFQ9UHQ1 456 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
NUP50-203ENST00000407019 CEP131Q9UPN4 1083 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 PDS5AQ29RF7 1337 aaKnown RBP19.36■□□□□ 0.69
NUP50-203ENST00000407019 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 RPS8P62241 208 aaKnown RBP19.36■□□□□ 0.69
NUP50-203ENST00000407019 NR5A1Q13285 461 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 IFIT1BQ5T764 474 aaKnown RBP19.36■□□□□ 0.69
NUP50-203ENST00000407019 ZNF384Q8TF68 577 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 TSC1Q92574 1164 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 NLRP3Q96P20 1036 aa19.36■□□□□ 0.69
NUP50-203ENST00000407019 HOOK1Q9UJC3 728 aaKnown RBP19.36■□□□□ 0.69
NUP50-203ENST00000407019 XBP1P17861 261 aa19.35■□□□□ 0.69
NUP50-203ENST00000407019 CATIPQ7Z7H3 387 aa19.35■□□□□ 0.69
NUP50-203ENST00000407019 IQCA1Q86XH1 822 aa19.35■□□□□ 0.69
NUP50-203ENST00000407019 CCDC150Q8NCX0 1101 aa19.35■□□□□ 0.69
NUP50-203ENST00000407019 NSUN4Q96CB9 384 aaKnown RBP19.35■□□□□ 0.69
NUP50-203ENST00000407019 FGRP09769 529 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 KLRK1P26718 216 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 MYL5Q02045 173 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 RC3H1Q5TC82 1133 aaKnown RBP19.34■□□□□ 0.69
NUP50-203ENST00000407019 CTR9Q6PD62 1173 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 OLFM4Q6UX06 510 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 SMIM5Q71RC9 77 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 TMC6Q7Z403 805 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 NBPF5PQ86XG9 351 aaPredicted RBP19.34■□□□□ 0.69
NUP50-203ENST00000407019 OXER1Q8TDS5 423 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms