RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 DEXIO95424 95 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 WTAPQ15007 396 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 RTN1Q16799 776 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 FBXO38Q6PIJ6 1188 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 DIS3L2Q8IYB7 885 aaKnown RBP12.32□□□□□ -0.44
CLIP4-204ENST00000404424 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 MLKLQ8NB16 471 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-204ENST00000404424 FANCLQ9NW38 375 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 SLAIN2Q9P270 581 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 BCL9O00512 1426 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 DOCK2Q92608 1830 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 BTBD18B2RXH4 712 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 RASGRF1Q13972 1273 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 POSTNQ15063 836 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLIP4-204ENST00000404424 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-204ENST00000404424 ITGB4P16144 1822 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 NUP98P52948 1817 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 GOLGA6L9A6NEM1 432 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 DZIP3Q86Y13 1208 aaKnown RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 ENOX1Q8TC92 643 aaKnown RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 ARMT1Q9H993 441 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 CHD4Q14839 1912 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 H2AFXP16104 143 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 TDO2P48775 406 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 CRACR2BQ8N4Y2 399 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 CCDC34Q96HJ3 373 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 MPHOSPH8Q99549 860 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 UTP14AQ9BVJ6 771 aaKnown RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 MAN1B1Q9UKM7 699 aa12.31□□□□□ -0.44
CLIP4-204ENST00000404424 SRPRBQ9Y5M8 271 aaKnown RBP12.31□□□□□ -0.44
CLIP4-204ENST00000404424 BMP6P22004 513 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 TBX2Q13207 712 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-204ENST00000404424 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 REXO1L1PQ8IX06 675 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
CLIP4-204ENST00000404424 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 DNAI1Q9UI46 699 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 STX10O60499 249 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 ZNF18P17022 549 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 GUCY1A2P33402 732 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 MORC3Q14149 939 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
CLIP4-204ENST00000404424 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
CLIP4-204ENST00000404424 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 POLR2DO15514 142 aaKnown RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 TPM1P09493 284 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 PDE4BQ07343 736 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 TMEM139Q8IV31 216 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 FANCBQ8NB91 859 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 SERTAD1Q9UHV2 236 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 UBE2Q2LH0YL09 131 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 XBP1P17861 261 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 FAM193AP78312 1265 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 NUTM2AQ8IVF1 878 aaPredicted RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 SPATA20Q8TB22 786 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 RNF26Q9BY78 433 aaPredicted RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 INTS13Q9NVM9 706 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
CLIP4-204ENST00000404424 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 NFE2L3Q9Y4A8 694 aa12.29□□□□□ -0.44
CLIP4-204ENST00000404424 FOXN1O15353 648 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 SPECC1Q5M775 1068 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 ZNF654Q8IZM8 581 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
CLIP4-204ENST00000404424 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
CLIP4-204ENST00000404424 PPP2R2CQ9Y2T4 447 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 PRKAB2O43741 272 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 UBXN4Q92575 508 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 ANAPC4Q9UJX5 808 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 PCDHB6Q9Y5E3 794 aa12.28□□□□□ -0.44
CLIP4-204ENST00000404424 VWA3AA6NCI4 1184 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 EFCAB8A8MWE9 144 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
CLIP4-204ENST00000404424 BMP15O95972 392 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms