RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
GABPA-202ENST00000400075 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 CCDC172P0C7W6 258 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
GABPA-202ENST00000400075 NONOQ15233 471 aaKnown RBP eCLIP16.3■□□□□ 0.25e-7■■■■□ 24.5
GABPA-202ENST00000400075 CCDC183Q5T5S1 534 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 PNMA3Q9UL41 463 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
GABPA-202ENST00000400075 ADORA1P30542 326 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 KRT26Q7Z3Y9 468 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 HACE1Q8IYU2 909 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 DHX58Q96C10 678 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
GABPA-202ENST00000400075 CTNNA2P26232 953 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 AOC3Q16853 763 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
GABPA-202ENST00000400075 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 PI4KBQ9UBF8 816 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
GABPA-202ENST00000400075 SPTLC2O15270 562 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
GABPA-202ENST00000400075 PDE4DQ08499 809 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
GABPA-202ENST00000400075 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 TBC1D2Q9BYX2 928 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
GABPA-202ENST00000400075 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
GABPA-202ENST00000400075 SLC27A2O14975 620 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 UBE3CQ15386 1083 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 DPH6Q7L8W6 267 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
GABPA-202ENST00000400075 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
GABPA-202ENST00000400075 SPICE1Q8N0Z3 855 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 CCDC97Q96F63 343 aaPredicted RBP16.28■□□□□ 0.2
GABPA-202ENST00000400075 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 FBXO11Q86XK2 927 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
GABPA-202ENST00000400075 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 AP5M1Q9H0R1 490 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 RNF123Q5XPI4 1314 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 SGSM2O43147 1006 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 ZNF174Q15697 407 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 SYCE3A1L190 88 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 PIK3AP1Q6ZUJ8 805 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 CPLX3Q8WVH0 158 aa16.28■□□□□ 0.2
GABPA-202ENST00000400075 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
GABPA-202ENST00000400075 ARHGEF40Q8TER5 1519 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 ECE2O60344 883 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.2
GABPA-202ENST00000400075 TXKP42681 527 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 CCDC117Q8IWD4 279 aaPredicted RBP16.27■□□□□ 0.2
GABPA-202ENST00000400075 IQUBQ8NA54 791 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 PLIN2Q99541 437 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 USP31Q70CQ4 1352 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 YEATS4O95619 227 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 RILPL1Q5EBL4 403 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 TBC1D32Q96NH3 1257 aa16.27■□□□□ 0.2
GABPA-202ENST00000400075 STRN3Q13033 797 aa16.27■□□□□ 0.19
GABPA-202ENST00000400075 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.19
GABPA-202ENST00000400075 CCDC65Q8IXS2 484 aa16.27■□□□□ 0.19
GABPA-202ENST00000400075 HAUS7Q99871 368 aa16.27■□□□□ 0.19
GABPA-202ENST00000400075 N4BP3O15049 544 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 GDF11O95390 407 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 NCAPH2Q6IBW4 605 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 FNBP1Q96RU3 617 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 FERMT1Q9BQL6 677 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 ABCC4O15439 1325 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 GCOM1H8Y6P7 765 aaPredicted RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 POLR2MP0CAP2 368 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 ZNF354CQ86Y25 554 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 ZNF710Q8N1W2 664 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 CPA1P15085 419 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 ADD3Q9UEY8 706 aaKnown RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 VWA3AA6NCI4 1184 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 SASH1O94885 1247 aa16.26■□□□□ 0.19
GABPA-202ENST00000400075 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
GABPA-202ENST00000400075 SKIDA1Q1XH10 827 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms