RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IFNAR1P17181 557 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 SPECC1Q5M775 1068 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 COL1A1P02452 1464 aaPredicted RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 BCL9LQ86UU0 1499 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 CTIFO43310 598 aaKnown RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 SHC4Q6S5L8 630 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 CACTINQ8WUQ7 758 aaKnown RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 MAP3K14Q99558 947 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 NAT10Q9H0A0 1025 aaKnown RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 RNF41Q9H4P4 317 aaPredicted RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 SYKP43405 635 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 PTPAQ15257 358 aa27.43■■□□□ 1.98
PABPN1-202ENST00000397276 RIOK1Q9BRS2 568 aaKnown RBP27.43■■□□□ 1.98
PABPN1-202ENST00000397276 ATP2B1P20020 1258 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 FILIP1Q7Z7B0 1213 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 NBPF5PQ86XG9 351 aaPredicted RBP27.42■■□□□ 1.98
PABPN1-202ENST00000397276 TRIM22Q8IYM9 498 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 ZNF654Q8IZM8 581 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 ZNF384Q8TF68 577 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 SETDB2Q96T68 719 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 GNPATO15228 680 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 DOCK2Q92608 1830 aa27.42■■□□□ 1.98
PABPN1-202ENST00000397276 TNKSO95271 1327 aa27.41■■□□□ 1.98
PABPN1-202ENST00000397276 EVX2Q03828 476 aa27.41■■□□□ 1.98
PABPN1-202ENST00000397276 NCBP1Q09161 790 aaKnown RBP27.41■■□□□ 1.98
PABPN1-202ENST00000397276 DIS3L2Q8IYB7 885 aaKnown RBP27.41■■□□□ 1.98
PABPN1-202ENST00000397276 FANCBQ8NB91 859 aa27.41■■□□□ 1.98
PABPN1-202ENST00000397276 hCG_1642624A0A1W2PR95 340 aa27.41■■□□□ 1.98
PABPN1-202ENST00000397276 RPS8P62241 208 aaKnown RBP27.4■■□□□ 1.98
PABPN1-202ENST00000397276 SARM1Q6SZW1 724 aa27.4■■□□□ 1.98
PABPN1-202ENST00000397276 NLRP3Q96P20 1036 aa27.4■■□□□ 1.98
PABPN1-202ENST00000397276 NR5A1Q13285 461 aa27.4■■□□□ 1.98
PABPN1-202ENST00000397276 NOSTRINQ8IVI9 506 aa27.4■■□□□ 1.98
PABPN1-202ENST00000397276 AMIGO3Q86WK7 504 aa27.39■■□□□ 1.98
PABPN1-202ENST00000397276 CRACR2BQ8N4Y2 399 aaPredicted RBP27.39■■□□□ 1.98
PABPN1-202ENST00000397276 ESR2Q92731 530 aa27.39■■□□□ 1.98
PABPN1-202ENST00000397276 NPHP1O15259 732 aa27.39■■□□□ 1.97
PABPN1-202ENST00000397276 MMP1P03956 469 aa27.39■■□□□ 1.97
PABPN1-202ENST00000397276 SAFBQ15424 915 aaKnown RBP eCLIP27.39■■□□□ 1.97
PABPN1-202ENST00000397276 JMYQ8N9B5 988 aa27.39■■□□□ 1.97
PABPN1-202ENST00000397276 PPP6R2O75170 966 aa27.38■■□□□ 1.97
PABPN1-202ENST00000397276 ZPR1O75312 459 aa27.38■■□□□ 1.97
PABPN1-202ENST00000397276 SLC4A8Q2Y0W8 1093 aa27.38■■□□□ 1.97
PABPN1-202ENST00000397276 NBPF11Q86T75 865 aa27.38■■□□□ 1.97
PABPN1-202ENST00000397276 WASF1Q92558 559 aa27.38■■□□□ 1.97
PABPN1-202ENST00000397276 STK36Q9NRP7 1315 aa27.38■■□□□ 1.97
PABPN1-202ENST00000397276 SLC51AQ86UW1 340 aa27.37■■□□□ 1.97
PABPN1-202ENST00000397276 TMTC2Q8N394 836 aa27.37■■□□□ 1.97
PABPN1-202ENST00000397276 MRFAP1L1Q96HT8 127 aa27.37■■□□□ 1.97
PABPN1-202ENST00000397276 GTPBP4Q9BZE4 634 aaKnown RBP27.37■■□□□ 1.97
PABPN1-202ENST00000397276 AATFQ9NY61 560 aaKnown RBP eCLIP27.37■■□□□ 1.97
PABPN1-202ENST00000397276 PNOCQ13519 176 aa27.37■■□□□ 1.97
PABPN1-202ENST00000397276 OXER1Q8TDS5 423 aa27.37■■□□□ 1.97
PABPN1-202ENST00000397276 RREB1Q92766 1687 aa27.37■■□□□ 1.97
PABPN1-202ENST00000397276 TOB1P50616 345 aaPredicted RBP27.37■■□□□ 1.97
PABPN1-202ENST00000397276 USP17L12C9JPN9 530 aa27.36■■□□□ 1.97
PABPN1-202ENST00000397276 USP17L21D6R901 530 aa27.36■■□□□ 1.97
PABPN1-202ENST00000397276 TOM1O60784 492 aa27.36■■□□□ 1.97
PABPN1-202ENST00000397276 NARFQ9UHQ1 456 aa27.36■■□□□ 1.97
PABPN1-202ENST00000397276 TNNT1P13805 278 aa27.36■■□□□ 1.97
PABPN1-202ENST00000397276 GRIN1Q05586 938 aa27.36■■□□□ 1.97
PABPN1-202ENST00000397276 ENAHQ8N8S7 591 aaPredicted RBP27.36■■□□□ 1.97
PABPN1-202ENST00000397276 LTBP4Q8N2S1 1624 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 CCDC196A0A1B0GTZ2 297 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 DEXIO95424 95 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 PRDX5P30044 214 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 CDC25BP30305 580 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 NLRP12P59046 1061 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 MECOMQ03112 1051 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 HPSEQ9Y251 543 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 SEC23AQ15436 765 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 LONRF3Q496Y0 759 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 SLC10A5Q5PT55 438 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 TXNRD3Q86VQ6 643 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 CNTNAP4Q9C0A0 1308 aa27.35■■□□□ 1.97
PABPN1-202ENST00000397276 HIBADHP31937 336 aaKnown RBP27.34■■□□□ 1.97
PABPN1-202ENST00000397276 FBXO33Q7Z6M2 555 aa27.34■■□□□ 1.97
PABPN1-202ENST00000397276 LRRC8AQ8IWT6 810 aa27.34■■□□□ 1.97
PABPN1-202ENST00000397276 ZSCAN10Q96SZ4 725 aaPredicted RBP27.34■■□□□ 1.97
PABPN1-202ENST00000397276 CHD4Q14839 1912 aa27.34■■□□□ 1.97
PABPN1-202ENST00000397276 CTR9Q6PD62 1173 aa27.34■■□□□ 1.97
PABPN1-202ENST00000397276 NSUN4Q96CB9 384 aaKnown RBP27.34■■□□□ 1.97
PABPN1-202ENST00000397276 CCNL1Q9UK58 526 aaPredicted RBP27.34■■□□□ 1.97
PABPN1-202ENST00000397276 RPS6KA4O75676 772 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 SMC2O95347 1197 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 IFIT1BQ5T764 474 aaKnown RBP27.33■■□□□ 1.97
PABPN1-202ENST00000397276 RESP18Q5W5W9 173 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 RGS22Q8NE09 1264 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 NYXQ9GZU5 481 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 ANAPC4Q9UJX5 808 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 PCDHB6Q9Y5E3 794 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 CICQ96RK0 1608 aaPredicted RBP27.33■■□□□ 1.97
PABPN1-202ENST00000397276 CABP5Q9NP86 173 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 VPS54Q9P1Q0 977 aa27.33■■□□□ 1.97
PABPN1-202ENST00000397276 RBM6P78332 1123 aaKnown RBP27.32■■□□□ 1.96
PABPN1-202ENST00000397276 VPS72Q15906 364 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 TPTE2Q6XPS3 522 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 ZNF592Q92610 1267 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms