RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
PPARG-205ENST00000397010 AK2P54819 239 aa16.57■□□□□ 0.24
PPARG-205ENST00000397010 SCN4AP35499 1836 aa16.56■□□□□ 0.24
PPARG-205ENST00000397010 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
PPARG-205ENST00000397010 KDM4AO75164 1064 aa16.56■□□□□ 0.24
PPARG-205ENST00000397010 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
PPARG-205ENST00000397010 SH3BP5LQ7L8J4 393 aa16.56■□□□□ 0.24
PPARG-205ENST00000397010 HSCBQ8IWL3 235 aa16.56■□□□□ 0.24
PPARG-205ENST00000397010 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
PPARG-205ENST00000397010 CNTNAP1P78357 1384 aa16.56■□□□□ 0.24
PPARG-205ENST00000397010 ANTXR2P58335 489 aa16.55■□□□□ 0.24
PPARG-205ENST00000397010 DHX32Q7L7V1 743 aaKnown RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 RNF41Q9H4P4 317 aaPredicted RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
PPARG-205ENST00000397010 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 MMP14P50281 582 aa16.55■□□□□ 0.24
PPARG-205ENST00000397010 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
PPARG-205ENST00000397010 Q6ZUG5 572 aa16.55■□□□□ 0.24
PPARG-205ENST00000397010 SNX21Q969T3 373 aa16.55■□□□□ 0.24
PPARG-205ENST00000397010 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
PPARG-205ENST00000397010 GPHNQ9NQX3 736 aaPredicted RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
PPARG-205ENST00000397010 PRC1O43663 620 aa16.54■□□□□ 0.24
PPARG-205ENST00000397010 MCM5P33992 734 aa16.54■□□□□ 0.24
PPARG-205ENST00000397010 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
PPARG-205ENST00000397010 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
PPARG-205ENST00000397010 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
PPARG-205ENST00000397010 KRT23Q9C075 422 aa16.54■□□□□ 0.24
PPARG-205ENST00000397010 HACL1Q9UJ83 578 aa16.54■□□□□ 0.24
PPARG-205ENST00000397010 FAM196BA6NMK8 535 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 RANBP6O60518 1105 aaKnown RBP16.53■□□□□ 0.24
PPARG-205ENST00000397010 ENTPD3O75355 529 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 HIRAP54198 1017 aaPredicted RBP16.53■□□□□ 0.24
PPARG-205ENST00000397010 PDE4BQ07343 736 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 TOB2Q14106 344 aaPredicted RBP16.53■□□□□ 0.24
PPARG-205ENST00000397010 BECN1Q14457 450 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 TTC6Q86TZ1 520 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
PPARG-205ENST00000397010 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
PPARG-205ENST00000397010 HLA-DOAP06340 250 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 FGRP09769 529 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 FGD1P98174 961 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 C16orf86Q6ZW13 317 aa16.53■□□□□ 0.24
PPARG-205ENST00000397010 GLTPD2A6NH11 291 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 K7ELQ4 463 aaPredicted RBP16.52■□□□□ 0.24
PPARG-205ENST00000397010 CDK8P49336 464 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
PPARG-205ENST00000397010 ESR2Q92731 530 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 CSRNP1Q96S65 589 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 SERPINB13Q9UIV8 391 aa16.52■□□□□ 0.24
PPARG-205ENST00000397010 ORC4O43929 436 aa16.52■□□□□ 0.23
PPARG-205ENST00000397010 GABPAQ06546 454 aa16.52■□□□□ 0.23
PPARG-205ENST00000397010 FAM151AQ8WW52 585 aa16.52■□□□□ 0.23
PPARG-205ENST00000397010 BRF1Q92994 677 aa16.52■□□□□ 0.23
PPARG-205ENST00000397010 L3MBTL3Q96JM7 780 aaPredicted RBP16.52■□□□□ 0.23
PPARG-205ENST00000397010 DHX36Q9H2U1 1008 aaKnown RBP16.52■□□□□ 0.23
PPARG-205ENST00000397010 DNAJC18Q9H819 358 aa16.52■□□□□ 0.23
PPARG-205ENST00000397010 ADARB2Q9NS39 739 aaKnown RBP16.52■□□□□ 0.23
PPARG-205ENST00000397010 GGA3Q9NZ52 723 aa16.52■□□□□ 0.23
PPARG-205ENST00000397010 ATAD5Q96QE3 1844 aa16.51■□□□□ 0.23
PPARG-205ENST00000397010 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
PPARG-205ENST00000397010 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
PPARG-205ENST00000397010 LARGE1O95461 756 aa16.51■□□□□ 0.23
PPARG-205ENST00000397010 PCP11498 1178 aaKnown RBP16.51■□□□□ 0.23
PPARG-205ENST00000397010 FKBP1CQ5VVH2 108 aa16.51■□□□□ 0.23
PPARG-205ENST00000397010 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
PPARG-205ENST00000397010 RASA1P20936 1047 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 RASA3Q14644 834 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
PPARG-205ENST00000397010 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 PI4KBQ9UBF8 816 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 TPCN1Q9ULQ1 816 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 NMT2O60551 498 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 PRKCSHP14314 528 aaPredicted RBP16.5■□□□□ 0.23
PPARG-205ENST00000397010 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
PPARG-205ENST00000397010 SHMT1P34896 483 aa16.49■□□□□ 0.23
PPARG-205ENST00000397010 EHD4Q9H223 541 aa16.49■□□□□ 0.23
PPARG-205ENST00000397010 TNKSO95271 1327 aa16.49■□□□□ 0.23
PPARG-205ENST00000397010 WDR19Q8NEZ3 1342 aa16.49■□□□□ 0.23
PPARG-205ENST00000397010 SH2B2O14492 632 aaPredicted RBP16.48■□□□□ 0.23
PPARG-205ENST00000397010 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
PPARG-205ENST00000397010 TNNI2P48788 182 aa16.48■□□□□ 0.23
PPARG-205ENST00000397010 MCM2P49736 904 aa16.48■□□□□ 0.23
PPARG-205ENST00000397010 TFAP4Q01664 338 aa16.48■□□□□ 0.23
PPARG-205ENST00000397010 TNFAIP1Q13829 316 aa16.48■□□□□ 0.23
PPARG-205ENST00000397010 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
PPARG-205ENST00000397010 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
PPARG-205ENST00000397010 AGXT2Q9BYV1 514 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms