RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 GPR182O15218 404 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 ADAMTS4O75173 837 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 IGHA2P01877 340 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-204ENST00000396464 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
GABPB1-204ENST00000396464 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 FMNL2Q96PY5 1086 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 METTL22Q9BUU2 404 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-204ENST00000396464 TMPRSS13Q9BYE2 586 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 SOX17Q9H6I2 414 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-204ENST00000396464 SUGCTQ9HAC7 445 aa6.57□□□□□ -1.36
GABPB1-204ENST00000396464 TYW1Q9NV66 732 aaKnown RBP6.57□□□□□ -1.36
GABPB1-204ENST00000396464 LOC100289279A0A1B0GTE1 492 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 CTSHP09668 335 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 PTMSP20962 102 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 GJA8P48165 433 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 CPSF6Q16630 551 aaKnown RBP eCLIP6.56□□□□□ -1.36
GABPB1-204ENST00000396464 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 NBPF4Q96M43 638 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 DMRTB1Q96MA1 342 aa6.56□□□□□ -1.36
GABPB1-204ENST00000396464 FOXD4Q12950 439 aaPredicted RBP6.55□□□□□ -1.36
GABPB1-204ENST00000396464 ENOX2Q16206 610 aaKnown RBP6.55□□□□□ -1.36
GABPB1-204ENST00000396464 HP1BP3Q5SSJ5 553 aaPredicted RBP6.55□□□□□ -1.36
GABPB1-204ENST00000396464 C11orf96Q7Z7L8 435 aa6.55□□□□□ -1.36
GABPB1-204ENST00000396464 GPATCH11Q8N954 259 aa6.55□□□□□ -1.36
GABPB1-204ENST00000396464 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
GABPB1-204ENST00000396464 FBLIM1Q8WUP2 373 aa6.55□□□□□ -1.36
GABPB1-204ENST00000396464 MKL1Q969V6 931 aa6.55□□□□□ -1.36
GABPB1-204ENST00000396464 CITED4Q96RK1 184 aa6.55□□□□□ -1.36
GABPB1-204ENST00000396464 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
GABPB1-204ENST00000396464 FOXD3Q9UJU5 478 aaPredicted RBP6.55□□□□□ -1.36
GABPB1-204ENST00000396464 F13BP05160 661 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 ESRRAP11474 423 aaPredicted RBP6.54□□□□□ -1.36
GABPB1-204ENST00000396464 DRD2P14416 443 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 FOSL1P15407 271 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 GNA15P30679 374 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 HOXA10P31260 410 aaPredicted RBP6.54□□□□□ -1.36
GABPB1-204ENST00000396464 C8orf48Q96LL4 319 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 TBC1D32Q96NH3 1257 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 SRPK1Q96SB4 655 aaKnown RBP6.54□□□□□ -1.36
GABPB1-204ENST00000396464 IER2Q9BTL4 223 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 ZFYVE1Q9HBF4 777 aa6.54□□□□□ -1.36
GABPB1-204ENST00000396464 CYP26A1O43174 497 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 TIAF1O95411 115 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 CLEC4GQ6UXB4 293 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 DDX54Q8TDD1 881 aaKnown RBP6.53□□□□□ -1.36
GABPB1-204ENST00000396464 FAM129BQ96TA1 746 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 SLKQ9H2G2 1235 aaPredicted RBP6.53□□□□□ -1.36
GABPB1-204ENST00000396464 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 CCDC87Q9NVE4 849 aa6.53□□□□□ -1.36
GABPB1-204ENST00000396464 GNL3LQ9NVN8 582 aaKnown RBP6.53□□□□□ -1.36
GABPB1-204ENST00000396464 GEMIN8Q9NWZ8 242 aaKnown RBP6.53□□□□□ -1.36
GABPB1-204ENST00000396464 PNMA6FA0A0J9YX94 578 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 CDC45O75419 566 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 CYP11A1P05108 521 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 EVA1CP58658 441 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 PTPN12Q05209 780 aaKnown RBP6.52□□□□□ -1.37
GABPB1-204ENST00000396464 SOX4Q06945 474 aaPredicted RBP6.52□□□□□ -1.37
GABPB1-204ENST00000396464 DUSP27Q5VZP5 1158 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 HS2ST1Q7LGA3 356 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 FERMT3Q86UX7 667 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 ALKBH8Q96BT7 664 aaKnown RBP6.52□□□□□ -1.37
GABPB1-204ENST00000396464 FBXL18Q96ME1 805 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 LATS2Q9NRM7 1088 aa6.52□□□□□ -1.37
GABPB1-204ENST00000396464 THRAP3Q9Y2W1 955 aaKnown RBP6.52□□□□□ -1.37
GABPB1-204ENST00000396464 FZD6O60353 706 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 PAK2Q13177 524 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 UBE4AQ14139 1066 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 MAP7Q14244 749 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 VSIG10LQ86VR7 867 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 ABI1Q8IZP0 508 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 FAM9BQ8IZU0 186 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 PNISRQ8TF01 805 aaKnown RBP6.51□□□□□ -1.37
GABPB1-204ENST00000396464 C12orf49Q9H741 205 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 ZFYVE28Q9HCC9 887 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 FANCLQ9NW38 375 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 SNTG2Q9NY99 539 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 ADGRE2Q9UHX3 823 aa6.51□□□□□ -1.37
GABPB1-204ENST00000396464 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 WDHD1O75717 1129 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-204ENST00000396464 DLGAP3O95886 979 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 POLR3DP05423 398 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-204ENST00000396464 RAB6AP20340 208 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 PCDH1Q08174 1060 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 MAP9Q49MG5 647 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 ALG1LQ6GMV1 187 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 DYMQ7RTS9 669 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-204ENST00000396464 GPRASP2Q96D09 838 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 CLEC4MQ9H2X3 399 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-204ENST00000396464 TMX1Q9H3N1 280 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 ZNF408Q9H9D4 720 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 KANSL2Q9H9L4 492 aa6.5□□□□□ -1.37
GABPB1-204ENST00000396464 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-204ENST00000396464 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms