RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 FLT1P17948 1338 aa19.8■□□□□ 0.76
CXCL12-206ENST00000395795 CYP2C8P10632 490 aa19.8■□□□□ 0.76
CXCL12-206ENST00000395795 DYNLL1P63167 89 aaKnown RBP19.8■□□□□ 0.76
CXCL12-206ENST00000395795 PICK1Q9NRD5 415 aa19.8■□□□□ 0.76
CXCL12-206ENST00000395795 DDX19BQ9UMR2 479 aa19.8■□□□□ 0.76
CXCL12-206ENST00000395795 BRCA2P51587 3418 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 KIAA0100Q14667 2235 aaKnown RBP19.79■□□□□ 0.76
CXCL12-206ENST00000395795 MS4A1P11836 297 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 SHROOM1Q2M3G4 852 aaPredicted RBP19.79■□□□□ 0.76
CXCL12-206ENST00000395795 ERC1Q8IUD2 1116 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 TGFBRAP1Q8WUH2 860 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 ZNF333Q96JL9 665 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 TRIM47Q96LD4 638 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.79■□□□□ 0.76
CXCL12-206ENST00000395795 PDE4DIPQ5VU43 2346 aa19.79■□□□□ 0.76
CXCL12-206ENST00000395795 RBBP6Q7Z6E9 1792 aaKnown RBP19.78■□□□□ 0.76
CXCL12-206ENST00000395795 CAP2P40123 477 aa19.78■□□□□ 0.76
CXCL12-206ENST00000395795 MAPKAPK5Q8IW41 473 aa19.78■□□□□ 0.76
CXCL12-206ENST00000395795 CYP7A1P22680 504 aa19.77■□□□□ 0.76
CXCL12-206ENST00000395795 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CXCL12-206ENST00000395795 SLC45A1Q9Y2W3 748 aa19.77■□□□□ 0.76
CXCL12-206ENST00000395795 TRIM75PA6NK02 468 aa19.76■□□□□ 0.75
CXCL12-206ENST00000395795 IDH1O75874 414 aaKnown RBP19.76■□□□□ 0.75
CXCL12-206ENST00000395795 BAG3O95817 575 aa19.76■□□□□ 0.75
CXCL12-206ENST00000395795 PLCG2P16885 1265 aa19.76■□□□□ 0.75
CXCL12-206ENST00000395795 TREML2Q5T2D2 321 aa19.76■□□□□ 0.75
CXCL12-206ENST00000395795 FASTKD5Q7L8L6 764 aaKnown RBP19.76■□□□□ 0.75
CXCL12-206ENST00000395795 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
CXCL12-206ENST00000395795 DHX36Q9H2U1 1008 aaKnown RBP19.76■□□□□ 0.75
CXCL12-206ENST00000395795 HERC5Q9UII4 1024 aaKnown RBP19.76■□□□□ 0.75
CXCL12-206ENST00000395795 PALD1Q9ULE6 856 aa19.76■□□□□ 0.75
CXCL12-206ENST00000395795 ATAD5Q96QE3 1844 aa19.76■□□□□ 0.75
CXCL12-206ENST00000395795 LOC285556D6RIA3 1793 aa19.75■□□□□ 0.75
CXCL12-206ENST00000395795 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
CXCL12-206ENST00000395795 HSP90AB4PQ58FF6 505 aa19.75■□□□□ 0.75
CXCL12-206ENST00000395795 MAGEB6Q8N7X4 407 aa19.75■□□□□ 0.75
CXCL12-206ENST00000395795 MIGA1Q8NAN2 632 aa19.75■□□□□ 0.75
CXCL12-206ENST00000395795 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
CXCL12-206ENST00000395795 PARK7Q99497 189 aaKnown RBP19.75■□□□□ 0.75
CXCL12-206ENST00000395795 MKI67P46013 3256 aaKnown RBP19.75■□□□□ 0.75
CXCL12-206ENST00000395795 OSBPP22059 807 aa19.74■□□□□ 0.75
CXCL12-206ENST00000395795 PSMC4P43686 418 aa19.74■□□□□ 0.75
CXCL12-206ENST00000395795 SPP2Q13103 211 aa19.74■□□□□ 0.75
CXCL12-206ENST00000395795 GADL1Q6ZQY3 521 aa19.74■□□□□ 0.75
CXCL12-206ENST00000395795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.74■□□□□ 0.75
CXCL12-206ENST00000395795 SRRDQ9UH36 339 aa19.74■□□□□ 0.75
CXCL12-206ENST00000395795 AGTPBP1Q9UPW5 1226 aa19.74■□□□□ 0.75
CXCL12-206ENST00000395795 DDX60LQ5H9U9 1706 aaKnown RBP19.73■□□□□ 0.75
CXCL12-206ENST00000395795 ECM2O94769 699 aaPredicted RBP19.73■□□□□ 0.75
CXCL12-206ENST00000395795 GNRH1P01148 92 aa19.73■□□□□ 0.75
CXCL12-206ENST00000395795 SH3D19Q5HYK7 790 aa19.73■□□□□ 0.75
CXCL12-206ENST00000395795 FOXP4Q8IVH2 680 aaPredicted RBP19.73■□□□□ 0.75
CXCL12-206ENST00000395795 ZNF280CQ8ND82 737 aa19.73■□□□□ 0.75
CXCL12-206ENST00000395795 EDC3Q96F86 508 aaKnown RBP19.73■□□□□ 0.75
CXCL12-206ENST00000395795 NOL10Q9BSC4 688 aaKnown RBP19.73■□□□□ 0.75
CXCL12-206ENST00000395795 SAP30BPQ9UHR5 308 aaKnown RBP19.73■□□□□ 0.75
CXCL12-206ENST00000395795 TCRBV5S4A2TA0A5A2 114 aa19.72■□□□□ 0.75
CXCL12-206ENST00000395795 APBB1O00213 710 aa19.72■□□□□ 0.75
CXCL12-206ENST00000395795 EN2P19622 333 aaPredicted RBP19.72■□□□□ 0.75
CXCL12-206ENST00000395795 ARHGEF6Q15052 776 aa19.72■□□□□ 0.75
CXCL12-206ENST00000395795 SH3TC2Q8TF17 1288 aa19.72■□□□□ 0.75
CXCL12-206ENST00000395795 WDR18Q9BV38 432 aa19.72■□□□□ 0.75
CXCL12-206ENST00000395795 USP17L5A8MUK1 530 aa19.71■□□□□ 0.75
CXCL12-206ENST00000395795 RAB11FIP3O75154 756 aa19.71■□□□□ 0.75
CXCL12-206ENST00000395795 HMMRO75330 724 aa19.71■□□□□ 0.75
CXCL12-206ENST00000395795 PRMT2P55345 433 aa19.71■□□□□ 0.75
CXCL12-206ENST00000395795 EVX2Q03828 476 aa19.71■□□□□ 0.75
CXCL12-206ENST00000395795 SLC9C1Q4G0N8 1177 aa19.71■□□□□ 0.75
CXCL12-206ENST00000395795 CLASRPQ8N2M8 674 aaKnown RBP19.71■□□□□ 0.75
CXCL12-206ENST00000395795 PROCA1Q8NCQ7 364 aaPredicted RBP19.71■□□□□ 0.75
CXCL12-206ENST00000395795 PDE6AP16499 860 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 HMGCS2P54868 508 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 KIF22Q14807 665 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 SLC4A8Q2Y0W8 1093 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 SLFNL1Q499Z3 407 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 TMED8Q6PL24 325 aaPredicted RBP19.7■□□□□ 0.74
CXCL12-206ENST00000395795 GABRQQ9UN88 632 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 MGAMO43451 1857 aa19.7■□□□□ 0.74
CXCL12-206ENST00000395795 MYH1P12882 1939 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 CHGBP05060 677 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 PRKCZQ05513 592 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 TATDN1Q6P1N9 297 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 POTEEQ6S8J3 1075 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 TBC1D2Q9BYX2 928 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 ZBTB21Q9ULJ3 1066 aa19.69■□□□□ 0.74
CXCL12-206ENST00000395795 GOLIM4O00461 696 aa19.68■□□□□ 0.74
CXCL12-206ENST00000395795 GDF11O95390 407 aa19.68■□□□□ 0.74
CXCL12-206ENST00000395795 MTFR1Q15390 333 aa19.68■□□□□ 0.74
CXCL12-206ENST00000395795 EHD4Q9H223 541 aa19.68■□□□□ 0.74
CXCL12-206ENST00000395795 FMNL1O95466 1100 aaPredicted RBP19.67■□□□□ 0.74
CXCL12-206ENST00000395795 ASNSP08243 561 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 IFIT2P09913 472 aaKnown RBP19.67■□□□□ 0.74
CXCL12-206ENST00000395795 ATP5JP18859 108 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 PLCD1P51178 756 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 BACE1P56817 501 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 GABPAQ06546 454 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 MTMR2Q13614 643 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 SLC9C2Q5TAH2 1124 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 DOCK3Q8IZD9 2030 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms