RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CCZ1BP86790 482 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 CCZ1P86791 482 aaPredicted RBP15.06■□□□□ 0
NFKB1-202ENST00000394820 ZSCAN26Q16670 478 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 RRAGBQ5VZM2 374 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 TTC19Q6DKK2 380 aaPredicted RBP15.06■□□□□ 0
NFKB1-202ENST00000394820 SAMSN1Q9NSI8 373 aaKnown RBP15.06■□□□□ 0
NFKB1-202ENST00000394820 ENC1O14682 589 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 EIF3JO75822 258 aaKnown RBP15.06■□□□□ 0
NFKB1-202ENST00000394820 MBD4O95243 580 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 CDC25AP30304 524 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 RNASE9P60153 205 aaKnown RBP15.06■□□□□ 0
NFKB1-202ENST00000394820 IGSF22Q8N9C0 903 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 LINC00301Q8NCQ3 95 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 SLF1Q9BQI6 1058 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 CRACR2AQ9BSW2 395 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
NFKB1-202ENST00000394820 SSBP05455 408 aaKnown RBP eCLIP15.05■□□□□ 0
NFKB1-202ENST00000394820 BCAMP50895 628 aa15.05■□□□□ 0
NFKB1-202ENST00000394820 NAA16Q6N069 864 aaPredicted RBP15.05■□□□□ 0
NFKB1-202ENST00000394820 ZHX3Q9H4I2 956 aa15.05■□□□□ 0
NFKB1-202ENST00000394820 PDE11AQ9HCR9 933 aa15.05■□□□□ 0
NFKB1-202ENST00000394820 TFRCP02786 760 aaKnown RBP15.05■□□□□ -0
NFKB1-202ENST00000394820 FAM182BQ5T319 152 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 DIS3L2Q8IYB7 885 aaKnown RBP15.05■□□□□ -0
NFKB1-202ENST00000394820 GOLGA1Q92805 767 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 TANGO6Q9C0B7 1094 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 DEF6Q9H4E7 631 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 VWA3AA6NCI4 1184 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 PRKAB2O43741 272 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 CCDC175P0C221 793 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 FBXO18Q8NFZ0 1043 aa15.05■□□□□ -0
NFKB1-202ENST00000394820 ATP2C2O75185 946 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 ZPR1O75312 459 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 SLFN14P0C7P3 912 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 CHMP4BP1P59074 171 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 NOM1Q5C9Z4 860 aaKnown RBP15.04■□□□□ -0
NFKB1-202ENST00000394820 SENP2Q9HC62 589 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 POLD4Q9HCU8 107 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 OVOS2A0A0G2JMS6 1433 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 RBM6P78332 1123 aaKnown RBP15.04■□□□□ -0
NFKB1-202ENST00000394820 DDB1Q16531 1140 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 CARMIL3Q8ND23 1372 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 IL17RAQ96F46 866 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 WDR24Q96S15 920 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 SOWAHDA6NJG2 315 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 XBP1P17861 261 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 NR5A1Q13285 461 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 RGS22Q8NE09 1264 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
NFKB1-202ENST00000394820 SLC4A9Q96Q91 983 aa15.04■□□□□ -0
NFKB1-202ENST00000394820 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 CTIFO43310 598 aaKnown RBP15.03■□□□□ -0
NFKB1-202ENST00000394820 ZFYP08048 801 aaPredicted RBP15.03■□□□□ -0
NFKB1-202ENST00000394820 IGHMBP2P38935 993 aaKnown RBP15.03■□□□□ -0
NFKB1-202ENST00000394820 SUGCTQ9HAC7 445 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 TRIM66O15016 1216 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 TOGARAM2Q6ZUX3 1019 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 TAB2Q9NYJ8 693 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 DACH1Q9UI36 760 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 CAMTA1Q9Y6Y1 1673 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 MACROD2A1Z1Q3 448 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 KIF28PB7ZC32 967 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 PDE8AO60658 829 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 SLC5A1P13866 664 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 PDE6AP16499 860 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 IRX5P78411 483 aaPredicted RBP15.03■□□□□ -0
NFKB1-202ENST00000394820 CCDC70Q6NSX1 233 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 MFSD6Q6ZSS7 791 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 PARD6BQ9BYG5 372 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 ACBD3Q9H3P7 528 aa15.03■□□□□ -0
NFKB1-202ENST00000394820 CTAGE15A4D2H0 777 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 CIAO1O76071 339 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 PDE8BO95263 885 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 CTAGE8P0CG41 777 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 MAP3K12Q12852 859 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 PTPROQ16827 1216 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 TSGA10IPQ3SY00 556 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 SUSD4Q5VX71 490 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 CTAGE6Q86UF2 777 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 CTAGE4Q8IX94 777 aa15.02■□□□□ -0
NFKB1-202ENST00000394820 CDC5LQ99459 802 aaKnown RBP15.02■□□□□ -0
NFKB1-202ENST00000394820 MAGEC2Q9UBF1 373 aaPredicted RBP15.02■□□□□ -0
NFKB1-202ENST00000394820 CTR9Q6PD62 1173 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 VAT1LQ9HCJ6 419 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 GPR108Q9NPR9 543 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 SLC4A4Q9Y6R1 1079 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 CYP19A1P11511 503 aaPredicted RBP15.02□□□□□ -0.01
NFKB1-202ENST00000394820 EXOSC10Q01780 885 aaKnown RBP15.02□□□□□ -0.01
NFKB1-202ENST00000394820 CCDC181Q5TID7 509 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 TBC1D10CQ8IV04 446 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 TXLNBQ8N3L3 684 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 KRI1Q8N9T8 703 aaKnown RBP15.02□□□□□ -0.01
NFKB1-202ENST00000394820 NACAP1Q9BZK3 213 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 BRMS1Q9HCU9 246 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 VPS54Q9P1Q0 977 aa15.02□□□□□ -0.01
NFKB1-202ENST00000394820 LMO7Q8WWI1 1683 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 WTIPA6NIX2 430 aaPredicted RBP15.01□□□□□ -0.01
NFKB1-202ENST00000394820 MCM7P33993 719 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 RTN1Q16799 776 aa15.01□□□□□ -0.01
NFKB1-202ENST00000394820 MICALL1Q8N3F8 863 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms