RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 MED15Q96RN5 788 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 HELLSQ9NRZ9 838 aa18.61■□□□□ 0.57
PHTF1-205ENST00000393357 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 MNAT1P51948 309 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 DIS3L2Q8IYB7 885 aaKnown RBP18.6■□□□□ 0.57
PHTF1-205ENST00000393357 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 FAM170AA1A519 330 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
PHTF1-205ENST00000393357 ZPR1O75312 459 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 FBXW10Q5XX13 1052 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 KRI1Q8N9T8 703 aaKnown RBP18.6■□□□□ 0.57
PHTF1-205ENST00000393357 OXER1Q8TDS5 423 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 DEF6Q9H4E7 631 aa18.6■□□□□ 0.57
PHTF1-205ENST00000393357 RNF225M0QZC1 329 aaPredicted RBP18.59■□□□□ 0.57
PHTF1-205ENST00000393357 PRDM1O75626 825 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 HOXB7P09629 217 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 TUBE1Q9UJT0 475 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 ZBTB43O43298 467 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 TBC1D10CQ8IV04 446 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 CHP1Q99653 195 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 CTNND2Q9UQB3 1225 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 BRD3Q15059 726 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 PCMTD1Q96MG8 357 aaPredicted RBP18.59■□□□□ 0.57
PHTF1-205ENST00000393357 KCND1Q9NSA2 647 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 SPATA31D1Q6ZQQ2 1576 aa18.59■□□□□ 0.57
PHTF1-205ENST00000393357 TSPOAP1O95153 1857 aa18.58■□□□□ 0.57
PHTF1-205ENST00000393357 CEMIPQ8WUJ3 1361 aa18.58■□□□□ 0.57
PHTF1-205ENST00000393357 ZNF185O15231 689 aa18.58■□□□□ 0.57
PHTF1-205ENST00000393357 CHRNA2Q15822 529 aa18.58■□□□□ 0.57
PHTF1-205ENST00000393357 EP400NLQ6ZTU2 488 aa18.58■□□□□ 0.57
PHTF1-205ENST00000393357 NUTM2AQ8IVF1 878 aaPredicted RBP18.58■□□□□ 0.57
PHTF1-205ENST00000393357 L1RE1Q9UN81 338 aa18.58■□□□□ 0.57
PHTF1-205ENST00000393357 MACROD2A1Z1Q3 448 aa18.58■□□□□ 0.56
PHTF1-205ENST00000393357 SAFBQ15424 915 aaKnown RBP eCLIP18.58■□□□□ 0.56
PHTF1-205ENST00000393357 ATG9AQ7Z3C6 839 aa18.58■□□□□ 0.56
PHTF1-205ENST00000393357 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
PHTF1-205ENST00000393357 BABAM1Q9NWV8 329 aa18.58■□□□□ 0.56
PHTF1-205ENST00000393357 IVLP07476 585 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 CD44P16070 742 aaKnown RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 SLC20A2Q08357 652 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 CEP112Q8N8E3 955 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 CABLES1Q8TDN4 633 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 XAGE2Q96GT9 111 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 CSRNP2Q9H175 543 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 CENPHQ9H3R5 247 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 GOLGA6L9A6NEM1 432 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 ORAI2Q96SN7 254 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 NAPGQ99747 312 aaPredicted RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 UBXN6Q9BZV1 441 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 ATG3Q9NT62 314 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 IQSEC3Q9UPP2 1182 aaPredicted RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 RANBP6O60518 1105 aaKnown RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 GPTP24298 496 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 PTPAQ15257 358 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 RESP18Q5W5W9 173 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 KCTD16Q68DU8 428 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 JADE2Q9NQC1 790 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 SMARCAL1Q9NZC9 954 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 ANGEL1Q9UNK9 670 aaKnown RBP18.57■□□□□ 0.56
PHTF1-205ENST00000393357 SLC12A7Q9Y666 1083 aa18.57■□□□□ 0.56
PHTF1-205ENST00000393357 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
PHTF1-205ENST00000393357 SETD1AO15047 1707 aaKnown RBP18.56■□□□□ 0.56
PHTF1-205ENST00000393357 ZEB2O60315 1214 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 GCP02774 474 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 PPARAQ07869 468 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 CCDC57Q2TAC2 916 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 AFAP1L1Q8TED9 768 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 C3P01024 1663 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 H0YHG0 523 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 KRT9P35527 623 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 ATP1A2P50993 1020 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 APOA5Q6Q788 366 aa18.56■□□□□ 0.56
PHTF1-205ENST00000393357 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
PHTF1-205ENST00000393357 MAP2K7O14733 419 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 TUBB4AP04350 444 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 GGCXP38435 758 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 SLC7A5Q01650 507 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 ZNF174Q15697 407 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 PXDNQ92626 1479 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 FOXP2O15409 715 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 ATP8B1O43520 1251 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 FILIP1LQ4L180 1135 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 CXCR5P32302 372 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 SSRP1Q08945 709 aaKnown RBP18.55■□□□□ 0.56
PHTF1-205ENST00000393357 CCDC148Q8NFR7 591 aa18.55■□□□□ 0.56
PHTF1-205ENST00000393357 RRAGBQ5VZM2 374 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 MMS19Q96T76 1030 aa18.54■□□□□ 0.56
PHTF1-205ENST00000393357 GNL3LQ9NVN8 582 aaKnown RBP18.54■□□□□ 0.56
PHTF1-205ENST00000393357 MYO6Q9UM54 1294 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms