RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
CTSC-202ENST00000393301 SH3TC2Q8TF17 1288 aa15.16■□□□□ 0.02
CTSC-202ENST00000393301 DHX36Q9H2U1 1008 aaKnown RBP15.16■□□□□ 0.02
CTSC-202ENST00000393301 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
CTSC-202ENST00000393301 MYPNQ86TC9 1320 aa15.16■□□□□ 0.02
CTSC-202ENST00000393301 TRIOBPQ9H2D6 2365 aa15.16■□□□□ 0.02
CTSC-202ENST00000393301 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 CYP2C8P10632 490 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 GRK4P32298 578 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 CAP2P40123 477 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 UBE2Q1Q7Z7E8 422 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 SHISA4Q96DD7 197 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 DBNDD2Q9BQY9 259 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 RAI14Q9P0K7 980 aa15.15■□□□□ 0.02
CTSC-202ENST00000393301 DDX60LQ5H9U9 1706 aaKnown RBP15.14■□□□□ 0.01
CTSC-202ENST00000393301 MYH1P12882 1939 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
CTSC-202ENST00000393301 GJB1P08034 283 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 RLBP1P12271 317 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 FAM110CQ1W6H9 321 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 CCDC158Q5M9N0 1113 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 CERS3Q8IU89 383 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 PXYLP1Q8TE99 480 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.14■□□□□ 0.01
CTSC-202ENST00000393301 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 PI4KBQ9UBF8 816 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 DBNLQ9UJU6 430 aaKnown RBP15.14■□□□□ 0.01
CTSC-202ENST00000393301 PNMA3Q9UL41 463 aa15.14■□□□□ 0.01
CTSC-202ENST00000393301 FMNL1O95466 1100 aaPredicted RBP15.13■□□□□ 0.01
CTSC-202ENST00000393301 BAG3O95817 575 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 GJA8P48165 433 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 PRKCZQ05513 592 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 NAA16Q6N069 864 aaPredicted RBP15.13■□□□□ 0.01
CTSC-202ENST00000393301 ZNF280CQ8ND82 737 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 RAET1EQ8TD07 263 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 FLT1P17948 1338 aa15.13■□□□□ 0.01
CTSC-202ENST00000393301 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
CTSC-202ENST00000393301 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
CTSC-202ENST00000393301 MTFR1Q15390 333 aa15.12■□□□□ 0.01
CTSC-202ENST00000393301 CEP85Q6P2H3 762 aa15.12■□□□□ 0.01
CTSC-202ENST00000393301 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
CTSC-202ENST00000393301 FTSJ3Q8IY81 847 aaKnown RBP15.12■□□□□ 0.01
CTSC-202ENST00000393301 SH3RF3Q8TEJ3 882 aaPredicted RBP15.12■□□□□ 0.01
CTSC-202ENST00000393301 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
CTSC-202ENST00000393301 PLXNB2O15031 1838 aa15.12■□□□□ 0.01
CTSC-202ENST00000393301 TRIM75PA6NK02 468 aa15.11■□□□□ 0.01
CTSC-202ENST00000393301 USP17L5A8MUK1 530 aa15.11■□□□□ 0.01
CTSC-202ENST00000393301 ASNSP08243 561 aa15.11■□□□□ 0.01
CTSC-202ENST00000393301 GCLCP48506 637 aaPredicted RBP15.11■□□□□ 0.01
CTSC-202ENST00000393301 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
CTSC-202ENST00000393301 TREML2Q5T2D2 321 aa15.11■□□□□ 0.01
CTSC-202ENST00000393301 ADGRA1Q86SQ6 560 aa15.11■□□□□ 0.01
CTSC-202ENST00000393301 FOXP4Q8IVH2 680 aaPredicted RBP15.11■□□□□ 0.01
CTSC-202ENST00000393301 EAF2Q96CJ1 260 aaPredicted RBP15.11■□□□□ 0.01
CTSC-202ENST00000393301 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
CTSC-202ENST00000393301 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
CTSC-202ENST00000393301 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.11■□□□□ 0.01
CTSC-202ENST00000393301 FAM196BA6NMK8 535 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
CTSC-202ENST00000393301 ZAP70P43403 619 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 UBXN2AP68543 259 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 SPP2Q13103 211 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 HABP4Q5JVS0 413 aaKnown RBP15.1■□□□□ 0.01
CTSC-202ENST00000393301 CCDC84Q86UT8 332 aaPredicted RBP15.1■□□□□ 0.01
CTSC-202ENST00000393301 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 SMCR8Q8TEV9 937 aaPredicted RBP15.1■□□□□ 0.01
CTSC-202ENST00000393301 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 AATFQ9NY61 560 aaKnown RBP eCLIP15.1■□□□□ 0.01
CTSC-202ENST00000393301 MORF4L1Q9UBU8 362 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 GABRQQ9UN88 632 aa15.1■□□□□ 0.01
CTSC-202ENST00000393301 CCL5P13501 91 aa15.09■□□□□ 0.01
CTSC-202ENST00000393301 FLT3LGP49771 235 aa15.09■□□□□ 0.01
CTSC-202ENST00000393301 BACE1P56817 501 aa15.09■□□□□ 0.01
CTSC-202ENST00000393301 OS9Q13438 667 aaPredicted RBP15.09■□□□□ 0.01
CTSC-202ENST00000393301 C1orf115Q9H7X2 142 aa15.09■□□□□ 0.01
CTSC-202ENST00000393301 PIH1D3Q9NQM4 214 aaKnown RBP15.09■□□□□ 0.01
CTSC-202ENST00000393301 SNRKQ9NRH2 765 aa15.09■□□□□ 0.01
CTSC-202ENST00000393301 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
CTSC-202ENST00000393301 C19orf81C9J6K1 198 aa15.08■□□□□ 0
CTSC-202ENST00000393301 HMGCS2P54868 508 aa15.08■□□□□ 0
CTSC-202ENST00000393301 AAMPQ13685 434 aa15.08■□□□□ 0
CTSC-202ENST00000393301 EHD4Q9H223 541 aa15.08■□□□□ 0
CTSC-202ENST00000393301 PAK6Q9NQU5 681 aaPredicted RBP15.08■□□□□ 0
CTSC-202ENST00000393301 SZT2Q5T011 3432 aa15.07■□□□□ 0
CTSC-202ENST00000393301 TNPO2O14787 897 aaKnown RBP15.07■□□□□ 0
CTSC-202ENST00000393301 ADCY3O60266 1144 aa15.07■□□□□ 0
CTSC-202ENST00000393301 HSP90AB4PQ58FF6 505 aa15.07■□□□□ 0
CTSC-202ENST00000393301 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
CTSC-202ENST00000393301 TGFBRAP1Q8WUH2 860 aa15.07■□□□□ 0
CTSC-202ENST00000393301 COA7Q96BR5 231 aa15.07■□□□□ 0
CTSC-202ENST00000393301 ASCC2Q9H1I8 757 aaPredicted RBP15.07■□□□□ 0
CTSC-202ENST00000393301 NAV1Q8NEY1 1877 aa15.06■□□□□ 0
CTSC-202ENST00000393301 SGPL1O95470 568 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms