RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ALX1Q15699 326 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 CCDC83Q8IWF9 413 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 STK11IPQ8N1F8 1099 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 SLC16A10Q8TF71 515 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 ZC3H12CQ9C0D7 883 aaKnown RBP22.01■■□□□ 1.11
CCDC50-202ENST00000392456 NAPBQ9H115 298 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.01■■□□□ 1.11
CCDC50-202ENST00000392456 GPATCH11Q8N954 259 aa22■■□□□ 1.11
CCDC50-202ENST00000392456 KCNQ5Q9NR82 932 aa22■■□□□ 1.11
CCDC50-202ENST00000392456 GTF2IP78347 998 aa22■■□□□ 1.11
CCDC50-202ENST00000392456 R3HDM1Q15032 1099 aaKnown RBP22■■□□□ 1.11
CCDC50-202ENST00000392456 DZIP1Q86YF9 867 aaKnown RBP22■■□□□ 1.11
CCDC50-202ENST00000392456 BRF1Q92994 677 aa22■■□□□ 1.11
CCDC50-202ENST00000392456 ALDH8A1Q9H2A2 487 aaPredicted RBP22■■□□□ 1.11
CCDC50-202ENST00000392456 KCNA3P22001 575 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 EVX2Q03828 476 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 STK3Q13188 491 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 MXD3Q9BW11 206 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 C10orf71Q711Q0 1435 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 TDO2P48775 406 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 CNKSR1Q969H4 720 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 INTS4Q96HW7 963 aaKnown RBP21.99■■□□□ 1.11
CCDC50-202ENST00000392456 ST7Q9NRC1 585 aa21.99■■□□□ 1.11
CCDC50-202ENST00000392456 GNAT2P19087 354 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 ANTXR2P58335 489 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 MFSD14BQ5SR56 506 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 MB21D2Q8IYB1 491 aaPredicted RBP21.98■■□□□ 1.11
CCDC50-202ENST00000392456 NOL10Q9BSC4 688 aaKnown RBP21.98■■□□□ 1.11
CCDC50-202ENST00000392456 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.98■■□□□ 1.11
CCDC50-202ENST00000392456 CYP2D7A0A087X1C5 515 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 C21orf2O43822 256 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 DPEP1P16444 411 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCDC50-202ENST00000392456 TSPY26PQ9H489 355 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 TOMM22Q9NS69 142 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 ZDHHC9Q9Y397 364 aa21.98■■□□□ 1.11
CCDC50-202ENST00000392456 MYO1CO00159 1063 aa21.97■■□□□ 1.11
CCDC50-202ENST00000392456 PRPF40AO75400 957 aaKnown RBP21.97■■□□□ 1.11
CCDC50-202ENST00000392456 HMGB1P09429 215 aaKnown RBP21.97■■□□□ 1.11
CCDC50-202ENST00000392456 SPTY2D1Q68D10 685 aaPredicted RBP21.97■■□□□ 1.11
CCDC50-202ENST00000392456 COA1Q9GZY4 146 aa21.97■■□□□ 1.11
CCDC50-202ENST00000392456 TMX4Q9H1E5 349 aaPredicted RBP21.97■■□□□ 1.11
CCDC50-202ENST00000392456 DBNDD1Q9H9R9 158 aa21.97■■□□□ 1.11
CCDC50-202ENST00000392456 CWC22Q9HCG8 908 aaKnown RBP21.97■■□□□ 1.11
CCDC50-202ENST00000392456 NEDD4P46934 1319 aa21.97■■□□□ 1.11
CCDC50-202ENST00000392456 GOLGA6L6A8MZA4 724 aa21.97■■□□□ 1.11
CCDC50-202ENST00000392456 SYT10Q6XYQ8 523 aa21.97■■□□□ 1.11
CCDC50-202ENST00000392456 ZNF397Q8NF99 534 aaPredicted RBP21.97■■□□□ 1.11
CCDC50-202ENST00000392456 TRIM66O15016 1216 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 APOBRQ0VD83 1088 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 C10orf67Q8IYJ2 551 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 FBXW7Q969H0 707 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 ANKRD1Q15327 319 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 CYB5R4Q7L1T6 521 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 CERS5Q8N5B7 392 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 NACAP1Q9BZK3 213 aa21.96■■□□□ 1.11
CCDC50-202ENST00000392456 FOXD4L5Q5VV16 416 aaPredicted RBP21.95■■□□□ 1.1
CCDC50-202ENST00000392456 NCOA7Q8NI08 942 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 FOXD4L4Q8WXT5 416 aaPredicted RBP21.95■■□□□ 1.1
CCDC50-202ENST00000392456 ZSCAN31Q96LW9 406 aaPredicted RBP21.95■■□□□ 1.1
CCDC50-202ENST00000392456 ZMYM6O95789 1325 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 MINDY4BA8MYZ0 360 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 B4E1Z4 1266 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 NAA30Q147X3 362 aaPredicted RBP21.95■■□□□ 1.1
CCDC50-202ENST00000392456 UVSSAQ2YD98 709 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 AGXT2Q9BYV1 514 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 SH2B1Q9NRF2 756 aaPredicted RBP21.95■■□□□ 1.1
CCDC50-202ENST00000392456 JRKLQ9Y4A0 524 aa21.95■■□□□ 1.1
CCDC50-202ENST00000392456 PSDA5PKW4 1024 aaPredicted RBP21.94■■□□□ 1.1
CCDC50-202ENST00000392456 SMTNL1A8MU46 457 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 PRC1O43663 620 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 FAM205AQ6ZU69 1335 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 SNED1Q8TER0 1413 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 KMT5BQ4FZB7 885 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 CHAMP1Q96JM3 812 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 PLCD4Q9BRC7 762 aa21.94■■□□□ 1.1
CCDC50-202ENST00000392456 KIF1CO43896 1103 aaKnown RBP21.93■■□□□ 1.1
CCDC50-202ENST00000392456 SH3RF3Q8TEJ3 882 aaPredicted RBP21.93■■□□□ 1.1
CCDC50-202ENST00000392456 PYCARDQ9ULZ3 195 aa21.93■■□□□ 1.1
CCDC50-202ENST00000392456 BAZ2AQ9UIF9 1905 aaKnown RBP21.93■■□□□ 1.1
CCDC50-202ENST00000392456 F8W031 263 aaPredicted RBP21.92■■□□□ 1.1
CCDC50-202ENST00000392456 SLC4A8Q2Y0W8 1093 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 RALYLQ86SE5 291 aaKnown RBP21.92■■□□□ 1.1
CCDC50-202ENST00000392456 TTLL6Q8N841 843 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 RNF217Q8TC41 542 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 DCP1AQ9NPI6 582 aaPredicted RBP21.92■■□□□ 1.1
CCDC50-202ENST00000392456 CCDC88AQ3V6T2 1871 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 PPARAQ07869 468 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 AOC3Q16853 763 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 SENP2Q9HC62 589 aa21.92■■□□□ 1.1
CCDC50-202ENST00000392456 USP17L12C9JPN9 530 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 USP17L21D6R901 530 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 AKNAD1Q5T1N1 836 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 RTFDC1Q9BY42 306 aaPredicted RBP21.91■■□□□ 1.1
CCDC50-202ENST00000392456 CYP2D6P10635 497 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 MAP2K1Q02750 393 aaPredicted RBP21.91■■□□□ 1.1
CCDC50-202ENST00000392456 EYA3Q99504 573 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 MTFR1LQ9H019 292 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 CXorf56Q9H5V9 222 aa21.91■■□□□ 1.1
CCDC50-202ENST00000392456 SH3BP1Q9Y3L3 701 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms