RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PPP1R14CQ8TAE6 165 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 ATP7BP35670 1465 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 SYNRGQ9UMZ2 1314 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 PCK1P35558 622 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 MXRA7P84157 204 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 CALCOCO2Q13137 446 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 NKIRAS1Q9NYS0 192 aa22.05■■□□□ 1.12
SHANK1-203ENST00000391813 TBCAO75347 108 aaKnown RBP22.05■■□□□ 1.12
SHANK1-203ENST00000391813 KRT24Q2M2I5 525 aa22.05■■□□□ 1.12
SHANK1-203ENST00000391813 CHST3Q7LGC8 479 aa22.05■■□□□ 1.12
SHANK1-203ENST00000391813 QTRT2Q9H974 415 aaKnown RBP22.05■■□□□ 1.12
SHANK1-203ENST00000391813 RRP15Q9Y3B9 282 aaKnown RBP22.05■■□□□ 1.12
SHANK1-203ENST00000391813 ERMNQ8TAM6 284 aa22.05■■□□□ 1.12
SHANK1-203ENST00000391813 WWC3Q9ULE0 1092 aa22.05■■□□□ 1.12
SHANK1-203ENST00000391813 NSFL1CQ9UNZ2 370 aaKnown RBP22.05■■□□□ 1.12
SHANK1-203ENST00000391813 SLC9C2Q5TAH2 1124 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 CACNA2D3Q8IZS8 1091 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 VPS16Q9H269 839 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 TET3O43151 1660 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 CEP85LQ5SZL2 805 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 ARHGEF25Q86VW2 580 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 EXOC4Q96A65 974 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 ABCC4O15439 1325 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 PLCG2P16885 1265 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 WDR66Q8TBY9 1149 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 PPP2R2CQ9Y2T4 447 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 TSNAXIP1Q2TAA8 658 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 SAR1BQ9Y6B6 198 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 CAPN7Q9Y6W3 813 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
SHANK1-203ENST00000391813 GNAT2P19087 354 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 EFCAB13Q8IY85 973 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 CUL5Q93034 780 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 MTUS1Q9ULD2 1270 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 ACTN4O43707 911 aaKnown RBP22.03■■□□□ 1.12
SHANK1-203ENST00000391813 VWA3BQ502W6 1294 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 NOX5Q96PH1 765 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 CCDC160A6NGH7 325 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 GOLGA8KD6RF30 607 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 RBM6P78332 1123 aaKnown RBP22.03■■□□□ 1.12
SHANK1-203ENST00000391813 TRAF1Q13077 416 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 CUL4AQ13619 759 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 BANK1Q8NDB2 785 aa22.03■■□□□ 1.12
SHANK1-203ENST00000391813 NR1I2O75469 434 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 MTMR3Q13615 1198 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 DTHD1Q6ZMT9 781 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 TTC6Q86TZ1 520 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 PNMA8AQ86V59 439 aaPredicted RBP22.02■■□□□ 1.12
SHANK1-203ENST00000391813 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 BCAS4Q8TDM0 211 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 TMEM87BQ96K49 555 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 METTL22Q9BUU2 404 aaPredicted RBP22.02■■□□□ 1.12
SHANK1-203ENST00000391813 SLC8A1P32418 973 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 GBP1P32455 592 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 TERF2Q15554 542 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 IQCDQ96DY2 449 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 KCNK9Q9NPC2 374 aa22.02■■□□□ 1.12
SHANK1-203ENST00000391813 STMN2Q93045 179 aa22.02■■□□□ 1.11
SHANK1-203ENST00000391813 ARID5AQ03989 594 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 ME3Q16798 604 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 KIAA0232Q92628 1395 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 DNAJC10Q8IXB1 793 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 CNKSR2Q8WXI2 1034 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 SPTLC3Q9NUV7 552 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 GNGT1P63211 74 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 PAXIP1Q6ZW49 1069 aaPredicted RBP22.01■■□□□ 1.11
SHANK1-203ENST00000391813 SYCP3Q8IZU3 236 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 NOC4LQ9BVI4 516 aaKnown RBP22.01■■□□□ 1.11
SHANK1-203ENST00000391813 LGR6Q9HBX8 967 aa22.01■■□□□ 1.11
SHANK1-203ENST00000391813 FEZ2Q9UHY8 353 aaPredicted RBP22.01■■□□□ 1.11
SHANK1-203ENST00000391813 STX10O60499 249 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 PHKG2P15735 406 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 CFAP221Q4G0U5 840 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 VCXQ9H320 206 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 EHMT1Q9H9B1 1298 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 ERBB4Q15303 1308 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 PAK1Q13153 545 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 MRVI1Q9Y6F6 885 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 SMIM23A6NLE4 172 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 POLR2DO15514 142 aaKnown RBP22■■□□□ 1.11
SHANK1-203ENST00000391813 POSTNQ15063 836 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 FAM196AQ6ZSG2 479 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 CAPS2Q9BXY5 557 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 CTNND2Q9UQB3 1225 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 SLC4A4Q9Y6R1 1079 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 ZNF521Q96K83 1311 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 RXRBP28702 533 aa22■■□□□ 1.11
SHANK1-203ENST00000391813 CCDC151A5D8V7 595 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 KRT79Q5XKE5 535 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 SREK1Q8WXA9 508 aaKnown RBP21.99■■□□□ 1.11
SHANK1-203ENST00000391813 MAP3K4Q9Y6R4 1608 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 A0A087WUV0 522 aaPredicted RBP21.99■■□□□ 1.11
SHANK1-203ENST00000391813 CYP7A1P22680 504 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 USP37Q86T82 979 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 KIF1BO60333 1816 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 USP6P35125 1406 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 PHLPP2Q6ZVD8 1323 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 PLCD1P51178 756 aa21.99■■□□□ 1.11
SHANK1-203ENST00000391813 PDLIM2Q96JY6 352 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms