RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SCN7AQ01118 1682 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 TNRQ92752 1358 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 A0A087WUV0 522 aaPredicted RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 SOWAHDA6NJG2 315 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 NEURL1BA8MQ27 555 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 E7EWF7 191 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 H3BQV1 296 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 FOXN1O15353 648 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 CBFA2T2O43439 604 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ACTN4O43707 911 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 MFAP3LO75121 409 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PPP6R2O75170 966 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 TOP1P11387 765 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ME1P48163 572 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 AMPHP49418 695 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 USP14P54578 494 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 UBASH3AP57075 661 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ERVK-24P63145 666 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 CCT2P78371 535 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PTPN12Q05209 780 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 DPYDQ12882 1025 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PNOCQ13519 176 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 TUBB2AQ13885 445 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 MORC3Q14149 939 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 KARSQ15046 597 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 NTRK3Q16288 839 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 IFFO2Q5TF58 517 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 HDXQ7Z353 690 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 TRAPPC11Q7Z392 1133 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ZNF572Q7Z3I7 529 aaPredicted RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 HOMER1Q86YM7 354 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 EFCAB13Q8IY85 973 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 SLC35F6Q8N357 371 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PRPF38AQ8NAV1 312 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 KLHDC4Q8TBB5 520 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ENOX1Q8TC92 643 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PPM1EQ8WY54 764 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 BAG1Q99933 345 aaPredicted RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 SH3GL2Q99962 352 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 DBNDD2Q9BQY9 259 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 TUBB2BQ9BVA1 445 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 SIL1Q9H173 461 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 EHD4Q9H223 541 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 LGR6Q9HBX8 967 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 MED4Q9NPJ6 270 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 DONSONQ9NYP3 566 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 VPS18Q9P253 973 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PCDHA5Q9Y5H7 936 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 NDUFB9Q9Y6M9 179 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ITGB4P16144 1822 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 WNK3Q9BYP7 1800 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ARFGEF1Q9Y6D6 1849 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 KCPQ6ZWJ8 1503 aa3.95□□□□□ -1.78
TRAV39-201ENST00000390466 ZNF335Q9H4Z2 1342 aaPredicted RBP3.95□□□□□ -1.78
TRAV39-201ENST00000390466 PRAMEF22A3QJZ6 481 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ANKRD65E5RJM6 399 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 RNF225M0QZC1 329 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 M0R2C6 588 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 PDE2AO00408 941 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 RNMTO43148 476 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 TEX33O43247 280 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 RANBP6O60518 1105 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 RNF40O75150 1001 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 GABBR2O75899 941 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 GYPCP04921 128 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 HMGB1P09429 215 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 MYBL2P10244 700 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 HSPD1P10809 573 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 CD44P16070 742 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 HNRNPH1P31943 449 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 TOB1P50616 345 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 EIF5P55010 431 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 SKOR1P84550 965 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 GRIN1Q05586 938 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 OS9Q13438 667 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 SART3Q15020 963 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 STK38Q15208 465 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 WHAMMP3Q1A5X7 153 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 MCMDC2Q4G0Z9 681 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 EMC10Q5UCC4 262 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 SPECC1LQ69YQ0 1117 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 WWC2Q6AWC2 1192 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 TTLL5Q6EMB2 1281 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ISM2Q6H9L7 571 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ZNF662Q6ZS27 426 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ATG9AQ7Z3C6 839 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 UBE3BQ7Z3V4 1068 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 SH3RF1Q7Z6J0 888 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 STK11IPQ8N1F8 1099 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 CEP112Q8N8E3 955 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ANKRD24Q8TF21 1146 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 AENQ8WTP8 325 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 FBXW7Q969H0 707 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 SHISA4Q96DD7 197 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 DRC1Q96MC2 740 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 AIFM3Q96NN9 605 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 PURBQ96QR8 312 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 SDF4Q9BRK5 362 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ESF1Q9H501 851 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms