RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGN1-202ENST00000380747 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-202ENST00000380747 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
HMGN1-202ENST00000380747 BOLA2Q9H3K6 86 aa11.23□□□□□ -0.61
HMGN1-202ENST00000380747 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-202ENST00000380747 ANGEL1Q9UNK9 670 aaKnown RBP11.23□□□□□ -0.61
HMGN1-202ENST00000380747 FZD1Q9UP38 647 aa11.23□□□□□ -0.61
HMGN1-202ENST00000380747 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
HMGN1-202ENST00000380747 GPR75-ASB3A0A0A6YYF3 556 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 GPR25O00155 361 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 ATP5JP18859 108 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 CYP7A1P22680 504 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 NFIAQ12857 509 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 PICALMQ13492 652 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 DSG2Q14126 1118 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 TTF1Q15361 905 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-202ENST00000380747 FKBP1CQ5VVH2 108 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
HMGN1-202ENST00000380747 SSC5DA1L4H1 1573 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 TBC1D8O95759 1140 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 BAG3O95817 575 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 RGS3P49796 1198 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 RHBDL3P58872 404 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-202ENST00000380747 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.61
HMGN1-202ENST00000380747 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
HMGN1-202ENST00000380747 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 IGSF3O75054 1194 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 FKTNO75072 461 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 IGHDP01880 384 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 C7P10643 843 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
HMGN1-202ENST00000380747 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 ZFPM1Q8IX07 1006 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-202ENST00000380747 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 HAUS7Q99871 368 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 IDI2Q9BXS1 227 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGN1-202ENST00000380747 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
HMGN1-202ENST00000380747 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-202ENST00000380747 C2orf72A6NCS6 295 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 ENTPD3O75355 529 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 USP2O75604 605 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-202ENST00000380747 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-202ENST00000380747 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 DYNLL1P63167 89 aaKnown RBP11.19□□□□□ -0.62
HMGN1-202ENST00000380747 SLC9C2Q5TAH2 1124 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
HMGN1-202ENST00000380747 MIGA1Q8NAN2 632 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 OTUD7AQ8TE49 926 aaPredicted RBP11.19□□□□□ -0.62
HMGN1-202ENST00000380747 DDX4Q9NQI0 724 aaKnown RBP11.19□□□□□ -0.62
HMGN1-202ENST00000380747 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
HMGN1-202ENST00000380747 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 RPAP1Q9BWH6 1393 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-202ENST00000380747 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 RANBP2P49792 3224 aaKnown RBP11.18□□□□□ -0.62
HMGN1-202ENST00000380747 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-202ENST00000380747 PDE6AP16499 860 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 INHBEP58166 350 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 FOXK1P85037 733 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 MAP3K11Q16584 847 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 HABP4Q5JVS0 413 aaKnown RBP11.18□□□□□ -0.62
HMGN1-202ENST00000380747 LDLRAD1Q5T700 205 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 MIGA2Q7L4E1 593 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 ANKRD13AQ8IZ07 590 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 CLMNQ96JQ2 1002 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
HMGN1-202ENST00000380747 RFX7Q2KHR2 1363 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 ZNF532Q9HCE3 1301 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-202ENST00000380747 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-202ENST00000380747 ERC2O15083 957 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 MX1P20591 662 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 PPP4CP60510 307 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 MAPKAPK5Q8IW41 473 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMGN1-202ENST00000380747 CSADQ9Y600 493 aa11.17□□□□□ -0.62
HMGN1-202ENST00000380747 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
HMGN1-202ENST00000380747 MAGEB6P1A0A0J9YX57 407 aa11.16□□□□□ -0.62
HMGN1-202ENST00000380747 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms