RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 COL2A1P02458 1487 aaPredicted RBP28.25■■■□□ 2.11
CDKN2B-202ENST00000380142 SRGAP3O43295 1099 aa28.24■■■□□ 2.11
CDKN2B-202ENST00000380142 SPP2Q13103 211 aa28.24■■■□□ 2.11
CDKN2B-202ENST00000380142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.24■■■□□ 2.11
CDKN2B-202ENST00000380142 FOCADQ5VW36 1801 aa28.24■■■□□ 2.11
CDKN2B-202ENST00000380142 CT47B1P0C2W7 299 aaPredicted RBP28.23■■■□□ 2.11
CDKN2B-202ENST00000380142 MVPQ14764 893 aaKnown RBP28.23■■■□□ 2.11
CDKN2B-202ENST00000380142 FAM110CQ1W6H9 321 aa28.23■■■□□ 2.11
CDKN2B-202ENST00000380142 OSBPL5Q9H0X9 879 aaPredicted RBP28.23■■■□□ 2.11
CDKN2B-202ENST00000380142 HDAC5Q9UQL6 1122 aa28.23■■■□□ 2.11
CDKN2B-202ENST00000380142 NR2E3Q9Y5X4 410 aa28.23■■■□□ 2.11
CDKN2B-202ENST00000380142 TFRCP02786 760 aaKnown RBP28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 RARSP54136 660 aaKnown RBP28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 PROCA1Q8NCQ7 364 aaPredicted RBP28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 DIS3LQ8TF46 1054 aaKnown RBP28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 TAOK2Q9UL54 1235 aa28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 TNNQ9UQP3 1299 aa28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 AKAP2Q9Y2D5 859 aa28.22■■■□□ 2.11
CDKN2B-202ENST00000380142 SPATA5Q8NB90 893 aa28.21■■■□□ 2.11
CDKN2B-202ENST00000380142 NEUROD6Q96NK8 337 aa28.21■■■□□ 2.11
CDKN2B-202ENST00000380142 MAST2Q6P0Q8 1798 aa28.21■■■□□ 2.11
CDKN2B-202ENST00000380142 DDX60LQ5H9U9 1706 aaKnown RBP28.21■■■□□ 2.11
CDKN2B-202ENST00000380142 SOX1O00570 391 aaPredicted RBP28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 ARID4AP29374 1257 aaPredicted RBP28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 CAP2P40123 477 aa28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 HMGCS2P54868 508 aa28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 TRIM32Q13049 653 aa28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 ZNF280CQ8ND82 737 aa28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 COA7Q96BR5 231 aa28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 PAWRQ96IZ0 340 aaKnown RBP28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 GJD2Q9UKL4 321 aa28.2■■■□□ 2.1
CDKN2B-202ENST00000380142 MCAMP43121 646 aa28.19■■■□□ 2.1
CDKN2B-202ENST00000380142 JAG1P78504 1218 aa28.19■■■□□ 2.1
CDKN2B-202ENST00000380142 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.19■■■□□ 2.1
CDKN2B-202ENST00000380142 PNMA3Q9UL41 463 aa28.19■■■□□ 2.1
CDKN2B-202ENST00000380142 ASCC2Q9H1I8 757 aaPredicted RBP28.18■■■□□ 2.1
CDKN2B-202ENST00000380142 PNMA6EA0A0J9YXQ4 647 aa28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 EVI5O60447 810 aa28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 GNAI3P08754 354 aa28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 MNX1P50219 401 aaPredicted RBP28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 SH3D19Q5HYK7 790 aa28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 SH3RF3Q8TEJ3 882 aaPredicted RBP28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 STAP2Q9UGK3 403 aa28.17■■■□□ 2.1
CDKN2B-202ENST00000380142 PEX10O60683 326 aa28.16■■■□□ 2.1
CDKN2B-202ENST00000380142 MAP4K4O95819 1239 aaPredicted RBP28.16■■■□□ 2.1
CDKN2B-202ENST00000380142 LDHCP07864 332 aa28.16■■■□□ 2.1
CDKN2B-202ENST00000380142 SHROOM1Q2M3G4 852 aaPredicted RBP28.16■■■□□ 2.1
CDKN2B-202ENST00000380142 ARHGAP45Q92619 1136 aa28.16■■■□□ 2.1
CDKN2B-202ENST00000380142 RAI14Q9P0K7 980 aa28.16■■■□□ 2.1
CDKN2B-202ENST00000380142 USP17L5A8MUK1 530 aa28.15■■■□□ 2.1
CDKN2B-202ENST00000380142 GCLCP48506 637 aaPredicted RBP28.15■■■□□ 2.1
CDKN2B-202ENST00000380142 GSTO1P78417 241 aa28.15■■■□□ 2.1
CDKN2B-202ENST00000380142 TEX11Q8IYF3 940 aa28.15■■■□□ 2.1
CDKN2B-202ENST00000380142 DNAJC18Q9H819 358 aa28.15■■■□□ 2.1
CDKN2B-202ENST00000380142 LAMA3Q16787 3333 aa28.14■■■□□ 2.1
CDKN2B-202ENST00000380142 CAPN2P17655 700 aa28.14■■■□□ 2.1
CDKN2B-202ENST00000380142 LRCH3Q96II8 777 aa28.14■■■□□ 2.1
CDKN2B-202ENST00000380142 A0A1W2PPC1 479 aa28.13■■■□□ 2.09
CDKN2B-202ENST00000380142 HMGCRP04035 888 aa28.13■■■□□ 2.09
CDKN2B-202ENST00000380142 ADGRA1Q86SQ6 560 aa28.13■■■□□ 2.09
CDKN2B-202ENST00000380142 TBC1D2Q9BYX2 928 aa28.13■■■□□ 2.09
CDKN2B-202ENST00000380142 MORF4L1Q9UBU8 362 aa28.13■■■□□ 2.09
CDKN2B-202ENST00000380142 TRIB2Q92519 343 aa28.12■■■□□ 2.09
CDKN2B-202ENST00000380142 HERC5Q9UII4 1024 aaKnown RBP28.12■■■□□ 2.09
CDKN2B-202ENST00000380142 TRIM27P14373 513 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 MTMR2Q13614 643 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 GORABQ5T7V8 394 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 NECAB2Q7Z6G3 386 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 WDR18Q9BV38 432 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 TXNRD2Q9NNW7 524 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 SNRKQ9NRH2 765 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 AATFQ9NY61 560 aaKnown RBP eCLIP28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 COL6A3P12111 3177 aa28.11■■■□□ 2.09
CDKN2B-202ENST00000380142 MYH1P12882 1939 aa28.1■■■□□ 2.09
CDKN2B-202ENST00000380142 POTEEQ6S8J3 1075 aa28.1■■■□□ 2.09
CDKN2B-202ENST00000380142 P2RX7Q99572 595 aaKnown RBP28.1■■■□□ 2.09
CDKN2B-202ENST00000380142 GDF15Q99988 308 aa28.1■■■□□ 2.09
CDKN2B-202ENST00000380142 RPTORQ8N122 1335 aa28.1■■■□□ 2.09
CDKN2B-202ENST00000380142 PABPC4Q13310 644 aaKnown RBP eCLIP28.09■■■□□ 2.09
CDKN2B-202ENST00000380142 ANKLE1Q8NAG6 615 aa28.09■■■□□ 2.09
CDKN2B-202ENST00000380142 LRP2BPQ9P2M1 347 aa28.09■■■□□ 2.09
CDKN2B-202ENST00000380142 PI4KBQ9UBF8 816 aa28.09■■■□□ 2.09
CDKN2B-202ENST00000380142 FRMPD3Q5JV73 1810 aa28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 GNAI2P04899 355 aa28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 BACE1P56817 501 aa28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 MAP3K21Q5TCX8 1036 aa28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 METTL16Q86W50 562 aaKnown RBP28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 C7orf61Q8IZ16 206 aa28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 AS3MTQ9HBK9 375 aa28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 HMX1Q9NP08 348 aaPredicted RBP28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 ZMYND8Q9ULU4 1186 aaPredicted RBP28.08■■■□□ 2.09
CDKN2B-202ENST00000380142 UQCRFS1P1P0C7P4 283 aa28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 HOXA7P31268 230 aaPredicted RBP28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 PPP4CP60510 307 aa28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 G3BP1Q13283 466 aaKnown RBP eCLIP28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 MAPKAPK5Q8IW41 473 aa28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 TGFBRAP1Q8WUH2 860 aa28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 DBNDD2Q9BQY9 259 aa28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 FLT1P17948 1338 aa28.07■■■□□ 2.08
CDKN2B-202ENST00000380142 CYP2B6P20813 491 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms