RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 DPF2Q92785 391 aa28.88■■■□□ 2.21
ECHDC3-201ENST00000379215 LARP6Q9BRS8 491 aaKnown RBP28.88■■■□□ 2.21
ECHDC3-201ENST00000379215 DHX36Q9H2U1 1008 aaKnown RBP28.88■■■□□ 2.21
ECHDC3-201ENST00000379215 TACC3Q9Y6A5 838 aa28.88■■■□□ 2.21
ECHDC3-201ENST00000379215 DDIT3P35638 169 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 TMEM67Q5HYA8 995 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 INCENPQ9NQS7 918 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 IFIT3O14879 490 aaKnown RBP28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 PRELPP51888 382 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 C16orf86Q6ZW13 317 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 STK11IPQ8N1F8 1099 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 MKNK2Q9HBH9 465 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 FOXD4L1Q9NU39 408 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 ECM29Q5VYK3 1845 aa28.87■■■□□ 2.21
ECHDC3-201ENST00000379215 COL2A1P02458 1487 aaPredicted RBP28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 MYO1BO43795 1136 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 RANBP6O60518 1105 aaKnown RBP28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 PFKFB2O60825 505 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 ENTPD3O75355 529 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 LARGE1O95461 756 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 APOBRQ0VD83 1088 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 SGMS1Q86VZ5 419 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 IGDCC4Q8TDY8 1250 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 GTF3C6Q969F1 213 aa28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 DDX4Q9NQI0 724 aaKnown RBP28.86■■■□□ 2.21
ECHDC3-201ENST00000379215 PLCD1P51178 756 aa28.85■■■□□ 2.21
ECHDC3-201ENST00000379215 ZNF280AP59817 542 aaPredicted RBP28.85■■■□□ 2.21
ECHDC3-201ENST00000379215 CCDC178Q5BJE1 867 aa28.85■■■□□ 2.21
ECHDC3-201ENST00000379215 CCDC83Q8IWF9 413 aa28.85■■■□□ 2.21
ECHDC3-201ENST00000379215 PRMT6Q96LA8 375 aaPredicted RBP28.84■■■□□ 2.21
ECHDC3-201ENST00000379215 SWAP70Q9UH65 585 aa28.84■■■□□ 2.21
ECHDC3-201ENST00000379215 MYH1P12882 1939 aa28.84■■■□□ 2.21
ECHDC3-201ENST00000379215 WTAPQ15007 396 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 FKBP1CQ5VVH2 108 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 EHD4Q9H223 541 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 TDRD3Q9H7E2 651 aaKnown RBP28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 KLF18A0A0U1RQI7 1052 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 PRDM1O75626 825 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 NFIAQ12857 509 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 ZNF444Q8N0Y2 327 aaPredicted RBP28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 ZSCAN10Q96SZ4 725 aaPredicted RBP28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 LY9Q9HBG7 655 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 SMC3Q9UQE7 1217 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 PCDHAC2Q9Y5I4 1007 aa28.83■■■□□ 2.21
ECHDC3-201ENST00000379215 CCDC69A6NI79 296 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 TSPY2A6NKD2 308 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 SMIM22K7EJ46 135 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 DHX16O60231 1041 aaKnown RBP28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 PDIA3P30101 505 aaKnown RBP28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 SYNE3Q6ZMZ3 975 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 NFXL1Q6ZNB6 911 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 LLPHQ9BRT6 129 aaKnown RBP28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 MYOZ2Q9NPC6 264 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 SERPINB13Q9UIV8 391 aa28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 DICER1Q9UPY3 1922 aaKnown RBP28.82■■■□□ 2.2
ECHDC3-201ENST00000379215 RCAN1P53805 252 aa28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 SLC4A8Q2Y0W8 1093 aa28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 SPDYE2Q495Y8 402 aa28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 DYNLL2Q96FJ2 89 aa28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 ZBED3Q96IU2 234 aaPredicted RBP28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 FAM198AQ9UFP1 575 aa28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 NAP1L2Q9ULW6 460 aaPredicted RBP28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 GJA3Q9Y6H8 435 aa28.81■■■□□ 2.2
ECHDC3-201ENST00000379215 ATRNL1Q5VV63 1379 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 TNKSO95271 1327 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 GOLGA8BA8MQT2 603 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 PDIA4P13667 645 aaKnown RBP28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 YBX3P16989 372 aaKnown RBP eCLIP28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 CDK8P49336 464 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 GMPSP49915 693 aaPredicted RBP28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 NUCB2P80303 420 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 GPC2Q8N158 579 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 NECAB1Q8N987 351 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 ZNF541Q9H0D2 1346 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 EVX2Q03828 476 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 GABPAQ06546 454 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 STK3Q13188 491 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 NKX2-3Q8TAU0 364 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 GPHNQ9NQX3 736 aaPredicted RBP28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 PI4KBQ9UBF8 816 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 ZNF70Q9UC06 446 aaPredicted RBP28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 SLC12A7Q9Y666 1083 aa28.8■■■□□ 2.2
ECHDC3-201ENST00000379215 TCP11L1Q9NUJ3 509 aa28.79■■■□□ 2.2
ECHDC3-201ENST00000379215 TSPY3P0CV98 308 aa28.78■■■□□ 2.2
ECHDC3-201ENST00000379215 TSPY8P0CW00 308 aa28.78■■■□□ 2.2
ECHDC3-201ENST00000379215 ST3GAL1Q11201 340 aa28.78■■■□□ 2.2
ECHDC3-201ENST00000379215 SCRN1Q12765 414 aa28.78■■■□□ 2.2
ECHDC3-201ENST00000379215 BRPF3Q9ULD4 1205 aa28.78■■■□□ 2.2
ECHDC3-201ENST00000379215 GOLGB1Q14789 3259 aaKnown RBP28.78■■■□□ 2.2
ECHDC3-201ENST00000379215 CACNB3P54284 484 aa28.77■■■□□ 2.2
ECHDC3-201ENST00000379215 TFAP4Q01664 338 aa28.77■■■□□ 2.2
ECHDC3-201ENST00000379215 SEC23AQ15436 765 aa28.77■■■□□ 2.2
ECHDC3-201ENST00000379215 APOA5Q6Q788 366 aa28.77■■■□□ 2.2
ECHDC3-201ENST00000379215 MICALL2Q8IY33 904 aa28.77■■■□□ 2.2
ECHDC3-201ENST00000379215 ZBTB43O43298 467 aa28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 RASA1P20936 1047 aa28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 TCP10Q12799 353 aa28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 IFIT1BQ5T764 474 aaKnown RBP28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 FAM83AQ86UY5 434 aa28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 ZSCAN29Q8IWY8 852 aaPredicted RBP28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms