RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 NTRK3Q16288 839 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 STRBPQ96SI9 672 aaKnown RBP19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 MAP3K14Q99558 947 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 FAM217BQ9NTX9 383 aaPredicted RBP19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 TUBE1Q9UJT0 475 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 DDX60Q8IY21 1712 aaKnown RBP19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 CBFA2T2O43439 604 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 RANBP6O60518 1105 aaKnown RBP19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 TOM1O60784 492 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 CFAP100Q494V2 611 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 TMEM67Q5HYA8 995 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 JMYQ8N9B5 988 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 DPF2Q92785 391 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 CCDC34Q96HJ3 373 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 TMEM87BQ96K49 555 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 LY9Q9HBG7 655 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 GOLGA8AA7E2F4 631 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 MUM1L1Q5H9M0 696 aa19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 DHX37Q8IY37 1157 aaKnown RBP19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 GPR161Q8N6U8 529 aaKnown RBP19.02■□□□□ 0.64
PCDHA1-201ENST00000378133 TCRBV5S4A2TA0A5A2 114 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 CTDSPL2Q05D32 466 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 GOLGA8FQ08AF8 430 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 GOLGA8DPQ0D2H9 430 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 TRIM29Q14134 588 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 ZBTB9Q96C00 473 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 MPHOSPH8Q99549 860 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 ZSWIM5Q9P217 1185 aa19.02■□□□□ 0.63
PCDHA1-201ENST00000378133 CASQ1P31415 396 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 LONRF3Q496Y0 759 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 SLC26A6Q9BXS9 759 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 ARFGAP3Q9NP61 516 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 UBN2Q6ZU65 1347 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 VWA3AA6NCI4 1184 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 SNAP23O00161 211 aa19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 TOP1P11387 765 aaKnown RBP19.01■□□□□ 0.63
PCDHA1-201ENST00000378133 COL14A1Q05707 1796 aaKnown RBP19■□□□□ 0.63
PCDHA1-201ENST00000378133 RESP18Q5W5W9 173 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 FCHSD1Q86WN1 690 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 FOXP4Q8IVH2 680 aaPredicted RBP19■□□□□ 0.63
PCDHA1-201ENST00000378133 BTG4Q9NY30 223 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 PPP2R2CQ9Y2T4 447 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 ATRNO75882 1429 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 IFIT3O14879 490 aaKnown RBP19■□□□□ 0.63
PCDHA1-201ENST00000378133 ARID4AP29374 1257 aaPredicted RBP19■□□□□ 0.63
PCDHA1-201ENST00000378133 GNG11P61952 73 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 ZSCAN26Q16670 478 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 SPECC1Q5M775 1068 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 IFNL3Q8IZI9 196 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 SLC12A7Q9Y666 1083 aa19■□□□□ 0.63
PCDHA1-201ENST00000378133 PATL2C9JE40 543 aaKnown RBP18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 UBAP1LF5GYI3 381 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 MAP3K9P80192 1104 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 PTPN21Q16825 1174 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 SGMS1Q86VZ5 419 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 METTL16Q86W50 562 aaKnown RBP18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 VSTM4Q8IW00 320 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 MAGEB6Q8N7X4 407 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 NAPBQ9H115 298 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 TOGARAM1Q9Y4F4 1720 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 ARHGAP6O43182 974 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 PDE8AO60658 829 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 UQCRFS1P1P0C7P4 283 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 MYL5Q02045 173 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 PPP2R3AQ06190 1150 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 CNNM3Q8NE01 707 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 SLC4A9Q96Q91 983 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 KCNH3Q9ULD8 1083 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
PCDHA1-201ENST00000378133 MBD4O95243 580 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 SSRP1Q08945 709 aaKnown RBP18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 WDR24Q96S15 920 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 PARD6BQ9BYG5 372 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 ARMT1Q9H993 441 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 PCDHA5Q9Y5H7 936 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 TMEM232C9JQI7 657 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 GUCY1A2P33402 732 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 STK11IPQ8N1F8 1099 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 CCDC82Q8N4S0 544 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 LPIN2Q92539 896 aa18.98■□□□□ 0.63
PCDHA1-201ENST00000378133 FAM237AA0A1B0GTK4 181 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 BTBD18B2RXH4 712 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 FOXN1O15353 648 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 CUTAO60888 179 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 CYP19A1P11511 503 aaPredicted RBP18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 RRP12Q5JTH9 1297 aaKnown RBP18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 SPATA5Q8NB90 893 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 AK7Q96M32 723 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 ZKSCAN3Q9BRR0 538 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 FANCLQ9NW38 375 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 LIFRP42702 1097 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 ALX1Q15699 326 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
PCDHA1-201ENST00000378133 PRKAB2O43741 272 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms