RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 RETREG2Q8NC44 543 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 TYW1Q9NV66 732 aaKnown RBP6.71□□□□□ -1.33
CUBN-202ENST00000377833 MBD5Q9P267 1494 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 MYL5Q02045 173 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 NBPF8Q3BBV2 869 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 NBPF14Q5TI25 921 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 HOMER3Q9NSC5 361 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 THEGQ9P2T0 379 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 SH3TC1Q8TE82 1336 aa6.71□□□□□ -1.33
CUBN-202ENST00000377833 UBASH3AP57075 661 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 DCAF15Q66K64 600 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 UTP11Q9Y3A2 253 aaKnown RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 NUTM2BA6NNL0 878 aaPredicted RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 NUTM2EB1AL46 878 aaPredicted RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 RFX1P22670 979 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 LACTBP83111 547 aaPredicted RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 ILF2Q12905 390 aaKnown RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 PPP1R21Q6ZMI0 780 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 ESYT1Q9BSJ8 1104 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 IFT122Q9HBG6 1241 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 BPIFB4P59827 614 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 CEBPZQ03701 1054 aaKnown RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 TCERG1LQ5VWI1 586 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 ZCRB1Q8TBF4 217 aaKnown RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 SLC26A4O43511 780 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 STK3Q13188 491 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 RUFY3Q7L099 469 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 STX8Q9UNK0 236 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 PREX1Q8TCU6 1659 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 WDR19Q8NEZ3 1342 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 CETN3O15182 167 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 RAB3GAP1Q15042 981 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 SRRM1Q8IYB3 904 aaKnown RBP6.71□□□□□ -1.34
CUBN-202ENST00000377833 SLFN12Q8IYM2 578 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 PLBD2Q8NHP8 589 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 MYO3AQ8NEV4 1616 aa6.71□□□□□ -1.34
CUBN-202ENST00000377833 BCAR3O75815 825 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 PAK2Q13177 524 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 TMC6Q7Z403 805 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 Q9H521 79 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 WDR17Q8IZU2 1322 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 LDHBP07195 334 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 DDB1Q16531 1140 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 NBPF11Q86T75 865 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 PRPF31Q8WWY3 499 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 STMN2Q93045 179 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 ZKSCAN5Q9Y2L8 839 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 AGLP35573 1532 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 FAM208AQ9UK61 1670 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 SARNPP82979 210 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 SV2BQ7L1I2 683 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 RNF14Q9UBS8 474 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 FOXP2O15409 715 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 ALDH1B1P30837 517 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 KPNA2P52292 529 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 ATP11AP98196 1134 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 ZSCAN23Q3MJ62 389 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 DAAM2Q86T65 1068 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 MCF2L2Q86YR7 1114 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 ARID3AQ99856 593 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 UBA5Q9GZZ9 404 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 MED23Q9ULK4 1368 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 ATP8B3O60423 1300 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 KDM2BQ8NHM5 1336 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 NUTM2GQ5VZR2 741 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 EP400NLQ6ZTU2 488 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 USP16Q9Y5T5 823 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 DDAH1O94760 285 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 PPP2R5AQ15172 486 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 PPP4R3CPQ6ZMV5 832 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 REXO1Q8N1G1 1221 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 GIPC1O14908 333 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 DSCC1Q9BVC3 393 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 TYW5A2RUC4 315 aaKnown RBP6.7□□□□□ -1.34
CUBN-202ENST00000377833 PHACTR2O75167 634 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 ATP8B2P98198 1209 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 IDI1Q13907 227 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 AOC3Q16853 763 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 AK8Q96MA6 479 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 DNAI1Q9UI46 699 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 JRKLQ9Y4A0 524 aa6.7□□□□□ -1.34
CUBN-202ENST00000377833 MAK16Q9BXY0 300 aaKnown RBP6.69□□□□□ -1.34
CUBN-202ENST00000377833 FAM96AQ9H5X1 160 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 HSPA6P17066 643 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 GNG11P61952 73 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 UBXN1Q04323 297 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 TBC1D2Q9BYX2 928 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 PICK1Q9NRD5 415 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 IPO11Q9UI26 975 aaKnown RBP6.69□□□□□ -1.34
CUBN-202ENST00000377833 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
CUBN-202ENST00000377833 SLIT1O75093 1534 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 CLTCQ00610 1675 aaKnown RBP6.69□□□□□ -1.34
CUBN-202ENST00000377833 DNM2P50570 870 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 NR1H3Q13133 447 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 GBP7Q8N8V2 638 aaPredicted RBP6.69□□□□□ -1.34
CUBN-202ENST00000377833 ATG3Q9NT62 314 aa6.69□□□□□ -1.34
CUBN-202ENST00000377833 ASPHQ12797 758 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms