RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 KRI1Q8N9T8 703 aaKnown RBP23.4■■□□□ 1.34
CLN5-201ENST00000377453 L2HGDHQ9H9P8 463 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 ATRNO75882 1429 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 PDE8AO60658 829 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 TRIM65Q6PJ69 517 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 ZNF771Q7L3S4 317 aaPredicted RBP23.4■■□□□ 1.34
CLN5-201ENST00000377453 SGMS1Q86VZ5 419 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.4■■□□□ 1.34
CLN5-201ENST00000377453 SLC4A4Q9Y6R1 1079 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 FMNL1O95466 1100 aaPredicted RBP23.39■■□□□ 1.34
CLN5-201ENST00000377453 CCDC93Q567U6 631 aa23.39■■□□□ 1.34
CLN5-201ENST00000377453 SHISA4Q96DD7 197 aa23.39■■□□□ 1.34
CLN5-201ENST00000377453 MED15Q96RN5 788 aa23.39■■□□□ 1.34
CLN5-201ENST00000377453 ECM29Q5VYK3 1845 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 COBLO75128 1261 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 FGFR2P21802 821 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 MDM2Q00987 491 aaPredicted RBP23.39■■□□□ 1.33
CLN5-201ENST00000377453 AKNAD1Q5T1N1 836 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 REXO1L1PQ8IX06 675 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 SDR42E1Q8WUS8 393 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 LPIN2Q92539 896 aa23.39■■□□□ 1.33
CLN5-201ENST00000377453 URI1O94763 535 aaPredicted RBP23.38■■□□□ 1.33
CLN5-201ENST00000377453 MMP1P03956 469 aa23.38■■□□□ 1.33
CLN5-201ENST00000377453 ARHGAP29Q52LW3 1261 aa23.38■■□□□ 1.33
CLN5-201ENST00000377453 MFSD6Q6ZSS7 791 aa23.38■■□□□ 1.33
CLN5-201ENST00000377453 FBXO2Q9UK22 296 aaPredicted RBP23.38■■□□□ 1.33
CLN5-201ENST00000377453 RTN1Q16799 776 aa23.38■■□□□ 1.33
CLN5-201ENST00000377453 SAMSN1Q9NSI8 373 aaKnown RBP23.38■■□□□ 1.33
CLN5-201ENST00000377453 PRDM1O75626 825 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 ETF1P62495 437 aaKnown RBP23.37■■□□□ 1.33
CLN5-201ENST00000377453 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 TMEM139Q8IV31 216 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 ZNF512BQ96KM6 892 aaPredicted RBP23.37■■□□□ 1.33
CLN5-201ENST00000377453 DESI2Q9BSY9 194 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 BTG4Q9NY30 223 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 NFE2L3Q9Y4A8 694 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 MINDY4BA8MYZ0 360 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 POSTNQ15063 836 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 EARS2Q5JPH6 523 aaKnown RBP23.37■■□□□ 1.33
CLN5-201ENST00000377453 ADGRA1Q86SQ6 560 aa23.37■■□□□ 1.33
CLN5-201ENST00000377453 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.37■■□□□ 1.33
CLN5-201ENST00000377453 CYP2D7A0A087X1C5 515 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 UQCRFS1P1P0C7P4 283 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 MAP3K12Q12852 859 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 WTAPQ15007 396 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 NOM1Q5C9Z4 860 aaKnown RBP23.36■■□□□ 1.33
CLN5-201ENST00000377453 TOGARAM2Q6ZUX3 1019 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 CABP5Q9NP86 173 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 SLIT2O94813 1529 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
CLN5-201ENST00000377453 FAM237AA0A1B0GTK4 181 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 KIF2AO00139 706 aaPredicted RBP23.36■■□□□ 1.33
CLN5-201ENST00000377453 WNT7AO00755 349 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 CLCN6P51797 869 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 CARD6Q9BX69 1037 aa23.36■■□□□ 1.33
CLN5-201ENST00000377453 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
CLN5-201ENST00000377453 IFNAR1P17181 557 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 KRT222Q8N1A0 295 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 ZBTB9Q96C00 473 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 VWA3AA6NCI4 1184 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 NRDCO43847 1150 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 SLFN14P0C7P3 912 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 CDK11BP21127 795 aaKnown RBP23.35■■□□□ 1.33
CLN5-201ENST00000377453 LIFRP42702 1097 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 STX17P56962 302 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 EVX2Q03828 476 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 WDR24Q96S15 920 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 CSRNP2Q9H175 543 aa23.35■■□□□ 1.33
CLN5-201ENST00000377453 A0A087X0B3 334 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 SLC5A1P13866 664 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 MTF1Q14872 753 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 KLHL10Q6JEL2 608 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 MPHOSPH8Q99549 860 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 VPS54Q9P1Q0 977 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.34■■□□□ 1.33
CLN5-201ENST00000377453 A0A0U1RQJ8 604 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 CBFA2T2O43439 604 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 AFMP43652 599 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 SMYD4Q8IYR2 804 aaPredicted RBP23.34■■□□□ 1.33
CLN5-201ENST00000377453 ATRIPQ8WXE1 791 aa23.34■■□□□ 1.33
CLN5-201ENST00000377453 SAFBQ15424 915 aaKnown RBP eCLIP23.33■■□□□ 1.33
CLN5-201ENST00000377453 STAMQ92783 540 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 PPP2R2CQ9Y2T4 447 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 SEC31AO94979 1220 aaKnown RBP23.33■■□□□ 1.33
CLN5-201ENST00000377453 PTPREP23469 700 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 KARSQ15046 597 aaKnown RBP23.33■■□□□ 1.33
CLN5-201ENST00000377453 ALX1Q15699 326 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 DHX58Q96C10 678 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 EPSTI1Q96J88 318 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 ABCF2Q9UG63 623 aa23.33■■□□□ 1.33
CLN5-201ENST00000377453 H2AFXP16104 143 aaPredicted RBP23.32■■□□□ 1.32
CLN5-201ENST00000377453 CRACR2BQ8N4Y2 399 aaPredicted RBP23.32■■□□□ 1.32
CLN5-201ENST00000377453 IRX2Q9BZI1 471 aaPredicted RBP23.32■■□□□ 1.32
CLN5-201ENST00000377453 LRP2BPQ9P2M1 347 aa23.32■■□□□ 1.32
CLN5-201ENST00000377453 TRIM22Q8IYM9 498 aa23.32■■□□□ 1.32
CLN5-201ENST00000377453 ZNF654Q8IZM8 581 aa23.32■■□□□ 1.32
CLN5-201ENST00000377453 SMARCE1Q969G3 411 aa23.31■■□□□ 1.32
CLN5-201ENST00000377453 PARP3Q9Y6F1 533 aa23.31■■□□□ 1.32
CLN5-201ENST00000377453 TEX33O43247 280 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms