RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 PRDM1O75626 825 aa14.94□□□□□ -0.02
CUL4A-203ENST00000375441 NOC3LQ8WTT2 800 aaKnown RBP14.94□□□□□ -0.02
CUL4A-203ENST00000375441 BPIFA3Q9BQP9 254 aa14.94□□□□□ -0.02
CUL4A-203ENST00000375441 VPS54Q9P1Q0 977 aa14.94□□□□□ -0.02
CUL4A-203ENST00000375441 PRDM4Q9UKN5 801 aa14.94□□□□□ -0.02
CUL4A-203ENST00000375441 OAS2P29728 719 aaKnown RBP14.93□□□□□ -0.02
CUL4A-203ENST00000375441 UBE3CQ15386 1083 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 INCENPQ9NQS7 918 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 WWC3Q9ULE0 1092 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 MAPK8IP1Q9UQF2 711 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 SYNRGQ9UMZ2 1314 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 CCDC194A0A1B0GVG4 234 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 PDE8AO60658 829 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 PHACTR2O75167 634 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 SPAG1Q07617 926 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 CNGA4Q8IV77 575 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 GUCA1BQ9UMX6 200 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 PXDNQ92626 1479 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 PHLPP2Q6ZVD8 1323 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 UBA7P41226 1012 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 MCAMP43121 646 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 CTSWP56202 376 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 DPF2Q92785 391 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 CRACR2AQ9BSW2 395 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 TRIM34Q9BYJ4 488 aa14.93□□□□□ -0.02
CUL4A-203ENST00000375441 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.92□□□□□ -0.02
CUL4A-203ENST00000375441 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 STX10O60499 249 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 MCM7P33993 719 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 CYB5R4Q7L1T6 521 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 TBC1D10CQ8IV04 446 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
CUL4A-203ENST00000375441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
CUL4A-203ENST00000375441 VPS18Q9P253 973 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 CTNND2Q9UQB3 1225 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 PDE8BO95263 885 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 NR5A1Q13285 461 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 SMC1AQ14683 1233 aaKnown RBP14.92□□□□□ -0.02
CUL4A-203ENST00000375441 CCDC152Q4G0S7 254 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 IQUBQ8NA54 791 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 CDK5RAP3Q96JB5 506 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 ZSWIM5Q9P217 1185 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 RAD21O60216 631 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 SHC4Q6S5L8 630 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 ZNF654Q8IZM8 581 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 PIH1D3Q9NQM4 214 aaKnown RBP14.92□□□□□ -0.02
CUL4A-203ENST00000375441 MAN1B1Q9UKM7 699 aa14.92□□□□□ -0.02
CUL4A-203ENST00000375441 PNMA6AP0CW24 399 aaPredicted RBP14.91□□□□□ -0.02
CUL4A-203ENST00000375441 CDC27P30260 824 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 STAT6P42226 847 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 CCDC181Q5TID7 509 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 TICAM2Q86XR7 235 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 SAMSN1Q9NSI8 373 aaKnown RBP14.91□□□□□ -0.02
CUL4A-203ENST00000375441 EXOC5O00471 708 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 UBXN1Q04323 297 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 FCHSD1Q86WN1 690 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 FANCBQ8NB91 859 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 RTL9Q8NET4 1388 aa14.91□□□□□ -0.02
CUL4A-203ENST00000375441 TANGO6Q9C0B7 1094 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 TMEM94Q12767 1356 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 SPA17Q15506 151 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 MAP9Q49MG5 647 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 MKNK2Q9HBH9 465 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 ST7Q9NRC1 585 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 RMND1Q9NWS8 449 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 ASAP1Q9ULH1 1129 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 FOXN1O15353 648 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 CAPN2P17655 700 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 MTIF2P46199 727 aaKnown RBP14.9□□□□□ -0.02
CUL4A-203ENST00000375441 RESP18Q5W5W9 173 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 NEK11Q8NG66 645 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 CDC5LQ99459 802 aaKnown RBP14.9□□□□□ -0.02
CUL4A-203ENST00000375441 PYM1Q9BRP8 204 aaKnown RBP14.9□□□□□ -0.02
CUL4A-203ENST00000375441 CSRNP2Q9H175 543 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 EPC1Q9H2F5 836 aa14.9□□□□□ -0.02
CUL4A-203ENST00000375441 TRIM21P19474 475 aaKnown RBP14.89□□□□□ -0.03
CUL4A-203ENST00000375441 ANTXR2P58335 489 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 BLZF1Q9H2G9 400 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 PRKAB2O43741 272 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 SOGA3Q5TF21 947 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 PLIN2Q99541 437 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 TAB2Q9NYJ8 693 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 COBLO75128 1261 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 FMNL1O95466 1100 aaPredicted RBP14.89□□□□□ -0.03
CUL4A-203ENST00000375441 JADE2Q9NQC1 790 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 PCDHB6Q9Y5E3 794 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 COL15A1P39059 1388 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 KRT9P35527 623 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 USP5P45974 858 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 PLCD1P51178 756 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 TTC38Q5R3I4 469 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 GIGYF2Q6Y7W6 1299 aaKnown RBP14.89□□□□□ -0.03
CUL4A-203ENST00000375441 HDXQ7Z353 690 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 TRIML1Q8N9V2 468 aa14.89□□□□□ -0.03
CUL4A-203ENST00000375441 NIP7Q9Y221 180 aaKnown RBP eCLIP14.89□□□□□ -0.03
CUL4A-203ENST00000375441 MMP1P03956 469 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms